RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	C3orf33	Q6P1S2	294 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	TRAPPC6B	Q86SZ2	158 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	FJX1	Q86VR8	437 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	CLRN3	Q8NCR9	226 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	OR10S1	Q8NGN2	331 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	NPRL2	Q8WTW4	380 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	CASTOR1	Q8WTX7	329 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	PNPLA2	Q96AD5	504 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	PDCD10	Q9BUL8	212 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	B3GAT1	Q9P2W7	334 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	GDF2	Q9UK05	429 aa	Predicted RBP	11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	KCNMB2	Q9Y691	235 aa		11.46	□□□□□ -0.57
SMTN-222	ENST00000612341	PCP4	P48539	62 aa		11.46	□□□□□ -0.58
SMTN-222	ENST00000612341	CASP6	P55212	293 aa		11.46	□□□□□ -0.58
SMTN-222	ENST00000612341	AWAT2	Q6E213	333 aa		11.46	□□□□□ -0.58
SMTN-222	ENST00000612341	RNF133	Q8WVZ7	376 aa		11.46	□□□□□ -0.58
SMTN-222	ENST00000612341	DNASE2B	Q8WZ79	361 aa		11.46	□□□□□ -0.58
SMTN-222	ENST00000612341	JSRP1	Q96MG2	331 aa	Predicted RBP	11.46	□□□□□ -0.58
SMTN-222	ENST00000612341	UTP23	Q9BRU9	249 aa	Known RBP	11.46	□□□□□ -0.58
SMTN-222	ENST00000612341	DEFB126	Q9BYW3	111 aa		11.46	□□□□□ -0.58
SMTN-222	ENST00000612341	C1orf198	Q9H425	327 aa		11.46	□□□□□ -0.58
SMTN-222	ENST00000612341	OCIAD1	Q9NX40	245 aa		11.46	□□□□□ -0.58
SMTN-222	ENST00000612341	MEGF11	A6BM72	1044 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	RP2	O75695	350 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	FOSL2	P15408	326 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	KMT5C	Q86Y97	462 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	STEAP2	Q8NFT2	490 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	OR5D18	Q8NGL1	313 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	OR2AJ1	Q8NGZ0	328 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	POC1B	Q8TC44	478 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	ZNF775	Q96BV0	537 aa	Predicted RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	PLEKHA6	Q9Y2H5	1048 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	IGHV5-10-1	A0A0J9YXX1	117 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	METTL21EP	A6NDL7	271 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	WIPF3	A6NGB9	483 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	GATC	O43716	136 aa	Known RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	SNAPIN	O95295	136 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	HLA-A	P01891	365 aa	Known RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	UBC	P0CG48	685 aa	Known RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	PPP3CB	P16298	524 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	C4BPB	P20851	252 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	VAMP1	P23763	118 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	PAN3	Q58A45	887 aa	Known RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	RHOU	Q7L0Q8	258 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	RABEPK	Q7Z6M1	372 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	ANGPTL5	Q86XS5	388 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	OR4K17	Q8NGC6	315 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	CCDC74B	Q96LY2	380 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	NICN1	Q9BSH3	213 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	MFF	Q9GZY8	342 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	BANF2	Q9H503	90 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	FAM206A	Q9NX38	181 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	SLC5A6	Q9Y289	635 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	B3GALT5	Q9Y2C3	310 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	IGHV3-15	A0A0B4J1V0	119 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341		A0A1B0GV90	55 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341		A0A1W2PP11	408 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	FAM74A7	A6NL05	159 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	TNRC18	O15417	2968 aa	Predicted RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	EIF1B	O60739	113 aa	Known RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	ZFAND5	O76080	213 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	EIF1	P41567	113 aa	Known RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	UNC119	Q13432	240 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	PLPPR5	Q32ZL2	321 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	FAM74A3	Q4VXF1	159 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	RNASE10	Q5GAN6	216 aa	Known RBP	11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	HDDC2	Q7Z4H3	204 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	CARF	Q8N187	725 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	TGIF2	Q9GZN2	237 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	ALKBH4	Q9NXW9	302 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	WIF1	Q9Y5W5	379 aa		11.45	□□□□□ -0.58
SMTN-222	ENST00000612341	ATG12	O94817	140 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	KLK3	P07288	261 aa	Predicted RBP	11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	ZNF806	P0C7X5	589 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	ZNF20	P17024	532 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	FST	P19883	344 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	ZP3	P21754	424 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	LAP3	P28838	519 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	STX12	Q86Y82	276 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	BEST3	Q8N1M1	668 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	RELL2	Q8NC24	303 aa	Predicted RBP	11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	OR1M1	Q8NGA1	313 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	OR5L2	Q8NGL0	311 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	NUBPL	Q8TB37	319 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	SPSB2	Q99619	263 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	PCED1A	Q9H1Q7	454 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	LDAH	Q9H6V9	325 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	UPB1	Q9UBR1	384 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	LHFPL6	Q9Y693	200 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	RAB27B	O00194	218 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	KCNAB3	O43448	404 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	ITGB2	P05107	769 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	VSIG8	P0DPA2	414 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	GABRA1	P14867	456 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	ZNF43	P17038	809 aa		11.44	□□□□□ -0.58
SMTN-222	ENST00000612341	AKR1C4	P17516	323 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms