RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 SYT9Q86SS6 491 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 NR2C2APQ86WQ0 139 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 ELMOD2Q8IZ81 293 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 ZNF433Q8N7K0 673 aaPredicted RBP7.05□□□□□ -1.28
TARDBP-213ENST00000611963 ZNF610Q8N9Z0 462 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 MCFD2Q8NI22 146 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 OR51E1Q8TCB6 317 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 SLC25A46Q96AG3 418 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 ZNF799Q96GE5 643 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 PGAM5Q96HS1 289 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 PSMG3-AS1Q96PY0 264 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 KCNS3Q9BQ31 491 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 SOX7Q9BT81 388 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 MED18Q9BUE0 208 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 HDHD2Q9H0R4 259 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 TP63Q9H3D4 680 aaPredicted RBP7.05□□□□□ -1.28
TARDBP-213ENST00000611963 CXorf56Q9H5V9 222 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 NIPAL2Q9H841 368 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 ZNF319Q9P2F9 582 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 NUFIP1Q9UHK0 495 aaKnown RBP7.05□□□□□ -1.28
TARDBP-213ENST00000611963 PROCRQ9UNN8 238 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 ZNF835Q9Y2P0 537 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 LRRK2Q5S007 2527 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 PLCE1Q9P212 2302 aa7.05□□□□□ -1.28
TARDBP-213ENST00000611963 TRAV8-7A0A075B6U6 113 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 A0A0G2JK05 382 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 A0A1B0GTI1 187 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 A0A1B0GVI7 797 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 A0A1W2PR80 420 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 CIB4A0PJX0 185 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 TBX1O43435 398 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 CRHP06850 196 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 HOXD4P09016 255 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 UBCP0CG48 685 aaKnown RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 EDN3P14138 238 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 COX5AP20674 150 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 CTSSP25774 331 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 APEX1P27695 318 aaKnown RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 CEACAM8P31997 349 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 OTX1P32242 354 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 TIMP3P35625 211 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 SOX6P35712 828 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 PEX19P40855 299 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 RORCP51449 518 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 RBPJQ06330 500 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 ECH1Q13011 328 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 SLC25A35Q3KQZ1 300 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 KRTAP27-1Q3LI81 207 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 ZNF404Q494X3 552 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 TMEM244Q5VVB8 128 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 ZNF704Q6ZNC4 412 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 RHOUQ7L0Q8 258 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 PRSS45Q7RTY3 260 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 MDP1Q86V88 176 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 CXorf67Q86X51 503 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 COMMD2Q86X83 199 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 CPEB3Q8NE35 698 aaKnown RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 OR13C3Q8NGS6 347 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 SPTSSAQ969W0 71 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 TMEM106AQ96A25 262 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 FAM71F1Q96KD3 344 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 LYZL4Q96KX0 146 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 ZFP3Q96NJ6 502 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 GFI1Q99684 422 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 C6orf62Q9GZU0 229 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 NXF2Q9GZY0 626 aaKnown RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 MOB1AQ9H8S9 216 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 SMURF1Q9HCE7 757 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 GPR84Q9NQS5 396 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 SLC17A5Q9NRA2 495 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 PLSCR4Q9NRQ2 329 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 PLEKHB1Q9UF11 243 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-213ENST00000611963 HHLA2Q9UM44 414 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 DHDHQ9UQ10 334 aa7.04□□□□□ -1.28
TARDBP-213ENST00000611963 LOC100509620A0A075B734 347 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 A0A0B4J203 849 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 TRAV1-2A0A0B4J238 106 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 A0A0G2JNJ9 132 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 A6NIN4 97 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 SYT7O43581 403 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 ARL6IP5O75915 188 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 UBL3O95164 117 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 LCATP04180 440 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 CCL2P13500 99 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 RAB3BP20337 219 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 MAPK3P27361 379 aaPredicted RBP7.03□□□□□ -1.28
TARDBP-213ENST00000611963 BMXP51813 675 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 TPTEP56180 551 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 RAB1AP62820 205 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 TGFBR3Q03167 851 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 GABRA6Q16445 453 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 SNAI3Q3KNW1 292 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 CEP78Q5JTW2 689 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 IDNKQ5T6J7 187 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 ASPHD2Q6ICH7 369 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 ZNF474Q6S9Z5 364 aaPredicted RBP7.03□□□□□ -1.28
TARDBP-213ENST00000611963 DRAM2Q6UX65 266 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 LUZP2Q86TE4 346 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 GABRG1Q8N1C3 465 aa7.03□□□□□ -1.28
TARDBP-213ENST00000611963 OR6Q1Q8NGQ2 317 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms