RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 POMZP3Q6PJE2 187 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 Q7L0L9 218 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 ZNF321PQ8N8H1 164 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 POC1AQ8NBT0 407 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 OR13H1Q8NG92 308 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 MRGPRX1Q96LB2 322 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 OCSTAMPQ9BR26 566 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 RTN4RQ9BZR6 473 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 C5orf66Q9H5L9 145 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 ARHGEF17Q96PE2 2063 aaPredicted RBP19.9■□□□□ 0.78
SHANK2-220ENST00000608988 FIGNL2A6NMB9 653 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 SYT7O43581 403 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 PRKNO60260 465 aaPredicted RBP19.9■□□□□ 0.78
SHANK2-220ENST00000608988 SFTA3P0C7M3 94 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 PTAFRP25105 342 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 CD1CP29017 333 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 BTNL8Q6UX41 500 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 CLEC18BQ6UXF7 455 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 ZNF761Q86XN6 746 aaPredicted RBP19.9■□□□□ 0.78
SHANK2-220ENST00000608988 RHBDD1Q8TEB9 315 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 ZNF721Q8TF20 911 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 TCEAL7Q9BRU2 100 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 PISDQ9UG56 409 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 SRPK3Q9UPE1 567 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 KPTNQ9Y664 436 aa19.9■□□□□ 0.78
SHANK2-220ENST00000608988 MPZL1O95297 269 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 DDAH2O95865 285 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 GAPDHP04406 335 aaKnown RBP19.89■□□□□ 0.77
SHANK2-220ENST00000608988 SPTBP11277 2137 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 ADH6P28332 368 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 IL15RAQ13261 267 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 HLA-DQA1Q5Y7H0 255 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 KCNG3Q8TAE7 436 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 GPR119Q8TDV5 335 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 OR8D2Q9GZM6 311 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 LPAR5Q9H1C0 372 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 HRH4Q9H3N8 390 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 TMEM231Q9H6L2 316 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 KIF26BQ2KJY2 2108 aa19.89■□□□□ 0.77
SHANK2-220ENST00000608988 C1orf196B1AJZ1 125 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 NPIPA5E9PKD4 350 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 PRAMEF26H0Y7S4 382 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 KCNAB3O43448 404 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 TTRP02766 147 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 S100A9P06702 114 aaKnown RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 FCGR3AP08637 254 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 HIST1H1DP16402 221 aaKnown RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 DVL1P1P54792 670 aaPredicted RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 F2RL1P55085 397 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 CLDN6P56747 220 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 EIF3IQ13347 325 aaKnown RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 SURF2Q15527 256 aaPredicted RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 ELAVL1Q15717 326 aaKnown RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 FAM76BQ5HYJ3 339 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 FAM109BQ6ICB4 259 aaPredicted RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 LHFPL1Q86WI0 220 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 SFTPA2Q8IWL1 248 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 COMMD1Q8N668 190 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 WNT2BQ93097 391 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 KCNK17Q96T54 332 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 CHRNA10Q9GZZ6 450 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 TCEAL2Q9H3H9 227 aaPredicted RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 OR5AC2Q9NZP5 309 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 NPIPA1Q9UND3 350 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 COL5A1P20908 1838 aaPredicted RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 MSGN1A6NI15 193 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 FTCDNL1E5RQL4 147 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 EIF3GO75821 320 aaKnown RBP eCLIP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 FARS2O95363 451 aaKnown RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 F12P00748 615 aaPredicted RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 CST4P01036 141 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 ZNF93P35789 620 aaPredicted RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 HABP2Q14520 560 aaPredicted RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 ANGPTL5Q86XS5 388 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 SLC22A18ASQ8N1D0 253 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 OR5H2Q8NGV7 314 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 RAB3CQ96E17 227 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 ADAT3Q96EY9 351 aaPredicted RBP19.88■□□□□ 0.77
SHANK2-220ENST00000608988 PBOV1Q9GZY1 135 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 UCK1Q9HA47 277 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 TAF9BQ9HBM6 251 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 SLC22A11Q9NSA0 550 aa19.88■□□□□ 0.77
SHANK2-220ENST00000608988 IGKV3D-11A0A0A0MRZ8 115 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 C10orf142B7Z368 130 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 PMELP40967 661 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 PTGFRP43088 359 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 PLCXD2Q0VAA5 305 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 EBPQ15125 230 aaKnown RBP19.87■□□□□ 0.77
SHANK2-220ENST00000608988 PARM1Q6UWI2 310 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 TMPPEQ6ZT21 453 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 PRR22Q8IZ63 422 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 TMEM234Q8WY98 164 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 ZNF251Q9BRH9 671 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 TUBA4BQ9H853 241 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 FAM96BQ9Y3D0 163 aa19.87■□□□□ 0.77
SHANK2-220ENST00000608988 SOX1O00570 391 aaPredicted RBP19.86■□□□□ 0.77
SHANK2-220ENST00000608988 UBE2CO00762 179 aa19.86■□□□□ 0.77
SHANK2-220ENST00000608988 ZNF217O75362 1048 aa19.86■□□□□ 0.77
SHANK2-220ENST00000608988 MED6O75586 246 aa19.86■□□□□ 0.77
SHANK2-220ENST00000608988 CELA2BP08218 269 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms