RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 XRCC2O43543 280 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 CELA3BP08861 270 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 SLC2A1P11166 492 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 ZNF12P17014 697 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 NR4A1P22736 598 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 PCSK6P29122 969 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 SLC6A9P48067 706 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 IDH3GP51553 393 aaPredicted RBP14.29□□□□□ -0.12
PMF1-206ENST00000606952 NCS1P62166 190 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 PPA1Q15181 289 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 MUCL1Q96DR8 90 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 MS4A3Q96HJ5 214 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 DERL3Q96Q80 235 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 KCNS3Q9BQ31 491 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 MED18Q9BUE0 208 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 HCFC1P51610 2035 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 PRR14LQ5THK1 2151 aa14.29□□□□□ -0.12
PMF1-206ENST00000606952 IGHV1-18A0A0C4DH31 117 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 LOC100506127A0A0U1RQW1 187 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 A0A1W2PR80 420 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 C5orf49A4QMS7 147 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 C5orf63A6NC05 138 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 CCDC160A6NGH7 325 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 ATE1O95260 518 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 CECR9P0C854 216 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 ZNF35P13682 527 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 WNT5AP41221 380 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 VBP1P61758 197 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 TFF3Q07654 80 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 INSL4Q14641 139 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 SNAI3Q3KNW1 292 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 C22orf42Q6IC83 251 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 XKRXQ6PP77 449 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 USP43Q70EL4 1123 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 DOK3Q7L591 496 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 KRT74Q7RTS7 529 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 KBTBD8Q8NFY9 601 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 OR51A4Q8NGJ6 313 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 CHD6Q8TD26 2715 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 ITLN2Q8WWU7 325 aaPredicted RBP14.28□□□□□ -0.12
PMF1-206ENST00000606952 C10orf35Q96D05 121 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 LRRC46Q96FV0 321 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 LYZL4Q96KX0 146 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 KCTD7Q96MP8 289 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 OR14A2Q96R54 314 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 OPA3Q9H6K4 179 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 EXOSC4Q9NPD3 245 aaKnown RBP14.28□□□□□ -0.12
PMF1-206ENST00000606952 BRD7Q9NPI1 651 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 NPAP1Q9NZP6 1156 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 GTF2A1LQ9UNN4 478 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 V9GYS6 101 aa14.28□□□□□ -0.12
PMF1-206ENST00000606952 FAM208BQ5VWN6 2430 aa14.27□□□□□ -0.12
PMF1-206ENST00000606952 TRAV1-2A0A0B4J238 106 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 hCG_38984A0A1B0GV85 526 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 FAM90A27PA6NNH2 459 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 P2RY10O00398 339 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 PIN1P1O15428 100 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 DHRS3O75911 302 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 ARL6IP5O75915 188 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 AGFG2O95081 481 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 LCATP04180 440 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 OCM2P0CE71 109 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 FSTP19883 344 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 TUBG1P23258 451 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 CFL1P23528 166 aaKnown RBP14.27□□□□□ -0.13
PMF1-206ENST00000606952 SPCS2Q15005 226 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 CDSNQ15517 529 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 CEACAM19Q7Z692 300 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 C1orf174Q8IYL3 243 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 RDH10Q8IZV5 341 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 PAQR4Q8N4S7 273 aaPredicted RBP14.27□□□□□ -0.13
PMF1-206ENST00000606952 OR51E1Q8TCB6 317 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 SGK3Q96BR1 496 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 DACH2Q96NX9 599 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 RNF167Q9H6Y7 350 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 CDH20Q9HBT6 801 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 SLC24A3Q9HC58 644 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 GPR84Q9NQS5 396 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 TUBG2Q9NRH3 451 aa14.27□□□□□ -0.13
PMF1-206ENST00000606952 IGHV2OR16-5A0A0B4J2B6 119 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 A0A1B0GVI7 797 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 SYT7O43581 403 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 SMPD2O60906 423 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 IL1AP01583 271 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 THBDP07204 575 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 CCL2P13500 99 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 MTNR1BP49286 362 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 LSM3P62310 102 aaKnown RBP14.26□□□□□ -0.13
PMF1-206ENST00000606952 NAAAQ02083 359 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 OR8B8Q15620 311 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 CNPY1Q3B7I2 92 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 GLYATL3Q5SZD4 288 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 C22orf34Q6ZV56 151 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 ZNF101Q8IZC7 436 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 PARP16Q8N5Y8 322 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 OR14K1Q8NGZ2 314 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 CA5BP1Q8WTZ4 195 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 AKAP1Q92667 903 aaKnown RBP eCLIP14.26□□□□□ -0.13
PMF1-206ENST00000606952 TMEM106AQ96A25 262 aa14.26□□□□□ -0.13
PMF1-206ENST00000606952 PPIL3Q9H2H8 161 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms