RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 HLA-DPB1P04440 258 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 RPS2P15880 293 aaKnown RBP13.24□□□□□ -0.29
VRK3-221ENST00000600284 HOXB6P17509 224 aaKnown RBP13.24□□□□□ -0.29
VRK3-221ENST00000600284 PMELP40967 661 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 ENTPD1P49961 510 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 RAD23AP54725 363 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 ACTG1P63261 375 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 PAX8Q06710 450 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 ZNF404Q494X3 552 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 ARMCX4Q5H9R4 360 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 LRRN1Q6UXK5 716 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 DCXRQ7Z4W1 244 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 KLBQ86Z14 1044 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 CCDC197Q8NCU1 140 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 OR11L1Q8NGX0 322 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 KCNJ15Q99712 375 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 TMEM246Q9BRR3 403 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 OPA3Q9H6K4 179 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 CD300LBA8K4G0 201 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 ZNF593O00488 134 aaPredicted RBP13.23□□□□□ -0.29
VRK3-221ENST00000600284 PTBP3O95758 552 aaKnown RBP13.23□□□□□ -0.29
VRK3-221ENST00000600284 T-ENOLP0DO92 83 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 RAP2AP10114 183 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 SPI1P17947 270 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 RPS27P42677 84 aaKnown RBP13.23□□□□□ -0.29
VRK3-221ENST00000600284 GNB2P62879 340 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 PAX2Q02962 417 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 ZNF92Q03936 586 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 PPP1R8Q12972 351 aaKnown RBP13.23□□□□□ -0.29
VRK3-221ENST00000600284 CRMP1Q14194 572 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 OR8G1Q15617 311 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 BTNL3Q6UXE8 466 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 RBMS3Q6XE24 437 aaKnown RBP13.23□□□□□ -0.29
VRK3-221ENST00000600284 NLRC3Q7RTR2 1065 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 ZDHHC22Q8N966 263 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 SPERTQ8NA61 448 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 OR51L1Q8NGJ5 315 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 OR9Q1Q8NGQ5 310 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 OR4Q3Q8NH05 313 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 GCDHQ92947 438 aaPredicted RBP13.23□□□□□ -0.29
VRK3-221ENST00000600284 SLAMF6Q96DU3 332 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 NEIL1Q96FI4 390 aaPredicted RBP13.23□□□□□ -0.29
VRK3-221ENST00000600284 LRGUKQ96M69 825 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 COPS4Q9BT78 406 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 MRPL15Q9P015 296 aaKnown RBP13.23□□□□□ -0.29
VRK3-221ENST00000600284 U3KQV3 271 aa13.23□□□□□ -0.29
VRK3-221ENST00000600284 ARRDC5A6NEK1 342 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 GGT3PA6NGU5 568 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 RIIAD1A6NNX1 92 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 ZNF878C9JN71 531 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 ZNF205O95201 554 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 CA6P23280 308 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 SLC15A1P46059 708 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 MZT1Q08AG7 82 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 TAF13Q15543 124 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 SNAI3Q3KNW1 292 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 LYPD4Q6UWN0 246 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 DCDC5Q6ZRR9 648 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 RHOUQ7L0Q8 258 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 ZNF511Q8NB15 262 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 OR10G2Q8NGC3 310 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 OR8B3Q8NGG8 313 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 RAB40AQ8WXH6 277 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 OR8B2Q96RD0 313 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 SP140LQ9H930 580 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 FN3KRPQ9HA64 309 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 CMC2Q9NRP2 79 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 ARMC1Q9NVT9 282 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 VNN3Q9NY84 501 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 TAS2R1Q9NYW7 299 aa13.22□□□□□ -0.29
VRK3-221ENST00000600284 IGHV2-70DA0A0C4DH43 119 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 IGHV3-64DA0A0J9YX35 117 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 XRCC2O43543 280 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 FAM20BO75063 409 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 SOX14O95416 240 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 CST1P01037 141 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 APOC1P02654 83 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 GYPBP06028 91 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 SPARCP09486 303 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 PSKH1P11801 424 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 ZNF3P17036 446 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 CFPP27918 469 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 CD80P33681 288 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 DDOSTP39656 456 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 PRSS12P56730 875 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 GRB2P62993 217 aaKnown RBP13.21□□□□□ -0.29
VRK3-221ENST00000600284 KCNJ8Q15842 424 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 KLF17Q5JT82 389 aaPredicted RBP13.21□□□□□ -0.29
VRK3-221ENST00000600284 GLYATL3Q5SZD4 288 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 LINC01590Q5TEZ4 76 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 DOK3Q7L591 496 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 TEX47Q8TBZ9 253 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 GIPC3Q8TF64 312 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 C22orf15Q8WYQ4 148 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 SPSB4Q96A44 273 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 DACT3Q96B18 629 aaPredicted RBP13.21□□□□□ -0.29
VRK3-221ENST00000600284 CHID1Q9BWS9 393 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 TOR3AQ9H497 397 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 ZMAT3Q9HA38 289 aaKnown RBP13.21□□□□□ -0.29
VRK3-221ENST00000600284 ESM1Q9NQ30 184 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms