RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 MOB1AQ9H8S9 216 aa10.44□□□□□ -0.74
SHKBP1-213ENST00000597325 SP140LQ9H930 580 aa10.44□□□□□ -0.74
SHKBP1-213ENST00000597325 CDH20Q9HBT6 801 aa10.44□□□□□ -0.74
SHKBP1-213ENST00000597325 BABAM2Q9NXR7 383 aa10.44□□□□□ -0.74
SHKBP1-213ENST00000597325 NDRG3Q9UGV2 375 aa10.44□□□□□ -0.74
SHKBP1-213ENST00000597325 R4GMQ9 66 aa10.44□□□□□ -0.74
SHKBP1-213ENST00000597325 FREM1Q5H8C1 2179 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 TENM1Q9UKZ4 2725 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 PRKDCP78527 4128 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 TMEM269A0A1B0GVZ9 245 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 C5orf49A4QMS7 147 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 M0R1B8 84 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 SERPINA5P05154 406 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 ANXA2P07355 339 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 JUNBP17275 347 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 CCNOP22674 350 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 CRYGSP22914 178 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 TGM4P49221 684 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 ZNF83P51522 516 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 MLLT11Q13015 90 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 CCDC58Q4VC31 144 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 BCL2L15Q5TBC7 163 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 XAF1Q6GPH4 301 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 ARL9Q6T311 187 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 DRAM2Q6UX65 266 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 WFDC8Q8IUA0 241 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 FAM169BQ8N8A8 192 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 CPEB3Q8NE35 698 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 ZC3HAV1LQ96H79 300 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 COG8Q96MW5 612 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 DCLRE1CQ96SD1 692 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 KCNS3Q9BQ31 491 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 C1QTNF6Q9BXI9 259 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 NGBQ9NPG2 151 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 ISYNA1Q9NPH2 558 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 GRIP1Q9Y3R0 1128 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 ALPK2Q86TB3 2170 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 MGAM2Q2M2H8 2515 aa10.43□□□□□ -0.74
SHKBP1-213ENST00000597325 NOTCH1P46531 2555 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 PNMA8CA0A1B0GUJ8 204 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 INMTO95050 263 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 IGKV3-15P01624 115 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 DBHP09172 617 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 ZNF14P17017 642 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 RPL5P46777 297 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 ZNF121P58317 390 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 MFGE8Q08431 387 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 ACSM1Q08AH1 577 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 TSTQ16762 297 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 C3orf36Q3SXR2 165 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 ARMCX4Q5H9R4 360 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 RPL22L1Q6P5R6 122 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 ZNF584Q8IVC4 421 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 ZFP41Q8N8Y5 198 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 ZNF485Q8NCK3 441 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 SLC7A6Q92536 515 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 MS4A3Q96HJ5 214 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 OPALINQ96PE5 141 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 COMMD4Q9H0A8 199 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 BRD7Q9NPI1 651 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 FAM206AQ9NX38 181 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 CRNNQ9UBG3 495 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 EIF3KQ9UBQ5 218 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 N6AMT1Q9Y5N5 214 aa10.42□□□□□ -0.74
SHKBP1-213ENST00000597325 IGHV1-18A0A0C4DH31 117 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 TRBV2A0A0J9YWF9 115 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 TUBAL3A6NHL2 446 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 ACOD1A6NK06 481 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 TBX1O43435 398 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 SPRY1O43609 319 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 IGLV1-44P01699 117 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 CELA3BP08861 270 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 ACSM4P0C7M7 580 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 CECR9P0C854 216 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 CELP19835 753 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 OTX1P32242 354 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 RGS6P49758 472 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 MMP16P51512 607 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 GTF2A1P52655 376 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 ALKBH1Q13686 389 aaKnown RBP10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 CDK5R1Q15078 307 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 KRTAP27-1Q3LI81 207 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 SYT6Q5T7P8 510 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 FDX2Q6P4F2 183 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 TMEM108Q6UXF1 575 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 UNQ6126/PRO20091Q6UXV3 157 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 FAM57BQ71RH2 274 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 GPR141Q7Z602 305 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 COMMD2Q86X83 199 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 CATSPERDQ86XM0 798 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 IL17RDQ8NFM7 739 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 OR2G2Q8NGZ5 317 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 SMIM19Q96E16 107 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 PGAM5Q96HS1 289 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 POM121L2Q96KW2 1035 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 C4orf45Q96LM5 186 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 ZNF75AQ96N20 296 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 OR10A2Q9H208 303 aa10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 NUFIP1Q9UHK0 495 aaKnown RBP10.41□□□□□ -0.74
SHKBP1-213ENST00000597325 OR52A1Q9UKL2 312 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms