RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 IFNA4P05014 189 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 GSTP1P09211 210 aaKnown RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 SPARCP09486 303 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 FBXO45P0C2W1 286 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 ZNF28P17035 718 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 PAX6P26367 422 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 EPHA8P29322 1005 aaPredicted RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 BDKRB2P30411 391 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 KNTC1P50748 2209 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 MMP16P51512 607 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 POLR2HP52434 150 aaKnown RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 ATP1B3P54709 279 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 ADAMTS20P59510 1910 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 B2MP61769 119 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 LCN6P62502 163 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 EIF5AP63241 154 aaKnown RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 ADAM8P78325 824 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 MFGE8Q08431 387 aaPredicted RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 TP53BP1Q12888 1972 aaPredicted RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 GOLGA4Q13439 2230 aaKnown RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 PPP1R1AQ13522 171 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 EIF2B1Q14232 305 aaKnown RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 ZNF542PQ5EBM4 170 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 VAX1Q5SQQ9 334 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 ZNF529Q6P280 563 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 CORO6Q6QEF8 472 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 CBLN3Q6UW01 205 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 C17orf107Q6ZR85 190 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 Q6ZSR6 202 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 FJX1Q86VR8 437 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 HOGA1Q86XE5 327 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 BAP18Q8IXM2 172 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 SPAG16Q8N0X2 631 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 SLC22A18ASQ8N1D0 253 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 GTPBP8Q8N3Z3 284 aaPredicted RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 DMBX1Q8NFW5 382 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 OR13H1Q8NG92 308 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 OR1S2Q8NGQ3 325 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 PTPMT1Q8WUK0 201 aaPredicted RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 ADIPOR1Q96A54 375 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 NARS2Q96I59 477 aaKnown RBP7.65□□□□□ -1.18
SIN3B-208ENST00000596638 SCGB3A2Q96PL1 93 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 LMF1Q96S06 567 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 CMKLR1Q99788 373 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 SEC11CQ9BY50 192 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 CST11Q9H112 138 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 BIN3Q9NQY0 253 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 CYTL1Q9NRR1 136 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 GPR27Q9NS67 375 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 SLC39A1Q9NY26 324 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 MBD2Q9UBB5 411 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 DKK4Q9UBT3 224 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 PISDQ9UG56 409 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 PCDHB10Q9UN67 800 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 SLC5A6Q9Y289 635 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 LRP12Q9Y561 859 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 POMT1Q9Y6A1 747 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 U3KQA8 63 aa7.65□□□□□ -1.18
SIN3B-208ENST00000596638 ASXL3Q9C0F0 2248 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 SMG1Q96Q15 3661 aaKnown RBP7.64□□□□□ -1.19
SIN3B-208ENST00000596638 TMED7-TICAM2A0A0A6YYA0 188 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 WIPF3A6NGB9 483 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 ZNF98A6NK75 572 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 PRAMEF26H0Y7S4 382 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 NUPL2O15504 423 aaKnown RBP7.64□□□□□ -1.19
SIN3B-208ENST00000596638 ZNF208O43345 1280 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 SLC16A7O60669 478 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 STK17BO94768 372 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 SNAPINO95295 136 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 PLATP00750 562 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 HLA-DQA2P01906 255 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 IGKV3-11P04433 115 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 FCER2P06734 321 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 ERCC1P07992 297 aaPredicted RBP7.64□□□□□ -1.19
SIN3B-208ENST00000596638 ZNF823P16415 610 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 RFC3P40938 356 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 CBX5P45973 191 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 CCR4P51679 360 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 NR0B1P51843 470 aaKnown RBP7.64□□□□□ -1.19
SIN3B-208ENST00000596638 PNLIPRP2P54317 469 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 SLC26A5P58743 744 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 IL13RA1P78552 427 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 ZNF117Q03924 483 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 GLO1Q04760 184 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 PJVKQ0ZLH3 352 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 GUCA2BQ16661 112 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 CDNFQ49AH0 187 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 FAM74A1Q5RGS3 127 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.64□□□□□ -1.19
SIN3B-208ENST00000596638 HAGHLQ6PII5 290 aaPredicted RBP7.64□□□□□ -1.19
SIN3B-208ENST00000596638 TRAPPC6BQ86SZ2 158 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 PARGQ86W56 976 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 PUSL1Q8N0Z8 303 aaKnown RBP7.64□□□□□ -1.19
SIN3B-208ENST00000596638 SLC22A24Q8N4F4 322 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 PAQR4Q8N4S7 273 aaPredicted RBP7.64□□□□□ -1.19
SIN3B-208ENST00000596638 ARRDC1Q8N5I2 433 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 PLPP7Q8NBV4 271 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 OR1M1Q8NGA1 313 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 OR4K17Q8NGC6 315 aa7.64□□□□□ -1.19
SIN3B-208ENST00000596638 OR13C3Q8NGS6 347 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms