RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 MRPL37Q9BZE1 423 aaKnown RBP13.73□□□□□ -0.21
PNKP-204ENST00000594661 WDR54Q9H977 334 aa13.73□□□□□ -0.21
PNKP-204ENST00000594661 ZNF705EA8MWA4 302 aaPredicted RBP13.72□□□□□ -0.21
PNKP-204ENST00000594661 NUDT14O95848 222 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 OR2T7P0C7T2 308 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 ACKR3P25106 362 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 CD81P60033 236 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 CBFBQ13951 182 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 GGTLC2Q14390 218 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 INPP5JQ15735 1006 aaPredicted RBP13.72□□□□□ -0.21
PNKP-204ENST00000594661 TP53I3Q53FA7 332 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 NCMAPQ5T1S8 102 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 C11orf87Q6NUJ2 197 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 POMZP3Q6PJE2 187 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 C1QL4Q86Z23 238 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 TGIF2LXQ8IUE1 241 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 SLC35F2Q8IXU6 374 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 BEST3Q8N1M1 668 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 KDF1Q8NAX2 398 aaPredicted RBP13.72□□□□□ -0.21
PNKP-204ENST00000594661 OR6K6Q8NGW6 343 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 OR6N1Q8NGY5 312 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 OR2T27Q8NH04 317 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 ZNRF4Q8WWF5 429 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 KTI12Q96EK9 354 aaPredicted RBP13.72□□□□□ -0.21
PNKP-204ENST00000594661 C1orf198Q9H425 327 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 PARPBPQ9NWS1 579 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 C19orf25Q9UFG5 118 aaPredicted RBP13.72□□□□□ -0.21
PNKP-204ENST00000594661 PCNX3Q9H6A9 2034 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 CXorf65A6NEN9 183 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 OR5H14A6NHG9 310 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 IFITM10A6NMD0 228 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 MAGEB4O15481 346 aaPredicted RBP13.72□□□□□ -0.21
PNKP-204ENST00000594661 FAUP35544 74 aaKnown RBP13.72□□□□□ -0.21
PNKP-204ENST00000594661 CASRP41180 1078 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 GLP1RP43220 463 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 CDX1P47902 265 aaPredicted RBP13.72□□□□□ -0.21
PNKP-204ENST00000594661 DIO1P49895 249 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 LTBQ06643 244 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 FOXO1Q12778 655 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 MST1LQ2TV78 715 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 DMKNQ6E0U4 476 aaPredicted RBP13.72□□□□□ -0.21
PNKP-204ENST00000594661 DUSP19Q8WTR2 217 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 RNF141Q8WVD5 230 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 GPX7Q96SL4 187 aaPredicted RBP13.72□□□□□ -0.21
PNKP-204ENST00000594661 MMP25Q9NPA2 562 aa13.72□□□□□ -0.21
PNKP-204ENST00000594661 TTC28Q96AY4 2481 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 A0A087X0M5 115 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 A0A1B0GTI1 187 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 A0A1B0GX30 115 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 C2orf72A6NCS6 295 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 SULT2B1O00204 365 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 IFNA2P01563 188 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 CD74P04233 296 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 UMODP07911 640 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 PGCP20142 388 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 DLSTP36957 453 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 ACTA2P62736 377 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 ACTG2P63267 376 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 ISXQ2M1V0 245 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 C4orf46Q504U0 113 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 OR10K2Q6IF99 312 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 LEG1Q6P5S2 330 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 C15orf40Q8WUR7 153 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 Q96M85 177 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 NXT1Q9UKK6 140 aaKnown RBP13.71□□□□□ -0.21
PNKP-204ENST00000594661 FOXJ3Q9UPW0 622 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 HIF3AQ9Y2N7 669 aa13.71□□□□□ -0.21
PNKP-204ENST00000594661 ACOD1A6NK06 481 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 A6NLC8 198 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 F8VVB4 439 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 F8VWA3 439 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 TMEM127O75204 238 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 ARL6IP5O75915 188 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 RLN1P04808 185 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 SFTA3P0C7M3 94 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 VAMP1P23763 118 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 CCKBRP32239 447 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 CLDN6P56747 220 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 CTXN1P60606 82 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 NUTF2P61970 127 aaKnown RBP13.7□□□□□ -0.22
PNKP-204ENST00000594661 PCOLCEQ15113 449 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 ALG10Q5BKT4 473 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 SLC35D3Q5M8T2 416 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 DRAM2Q6UX65 266 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.7□□□□□ -0.22
PNKP-204ENST00000594661 LRRTM1Q86UE6 522 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 ZNF511Q8NB15 262 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 SLC30A7Q8NEW0 376 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 GPR119Q8TDV5 335 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 LIPHQ8WWY8 451 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 GHSRQ92847 366 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 S100PBPQ96BU1 408 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 DNAJA3Q96EY1 480 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 NMNAT2Q9BZQ4 307 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 PTRH2Q9Y3E5 179 aaKnown RBP13.7□□□□□ -0.22
PNKP-204ENST00000594661 TIMM10BQ9Y5J6 103 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 B3GALT1Q9Y5Z6 326 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 C4orf47A7E2U8 309 aa13.7□□□□□ -0.22
PNKP-204ENST00000594661 F5H0A9 414 aaPredicted RBP13.7□□□□□ -0.22
PNKP-204ENST00000594661 CDX4O14627 284 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms