RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 IGHV4-61A0A0C4DH41 118 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 PLSCR5A0PG75 271 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 H0YJX3 145 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 MT-ND5P03915 603 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 SBK2P0C263 348 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 GABRB1P18505 474 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 HTR1FP30939 366 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 RBMXP38159 391 aaKnown RBP12.99□□□□□ -0.33
TRIM47-206ENST00000592942 SLC6A9P48067 706 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 CX3CR1P49238 355 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 ZNF121P58317 390 aaPredicted RBP12.99□□□□□ -0.33
TRIM47-206ENST00000592942 SNRPGP62308 76 aaKnown RBP12.99□□□□□ -0.33
TRIM47-206ENST00000592942 HNRNPA0Q13151 305 aaKnown RBP12.99□□□□□ -0.33
TRIM47-206ENST00000592942 CARTPTQ16568 116 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 LCN1P1Q5VSP4 162 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 LRRN1Q6UXK5 716 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 USP51Q70EK9 711 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 GID4Q8IVV7 300 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 RFLNBQ8N5W9 214 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 ZNF283Q8N7M2 679 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 FAM81AQ8TBF8 368 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 SLC30A2Q9BRI3 323 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 VCXQ9H320 206 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 FAM118AQ9NWS6 357 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 DNAJC27Q9NZQ0 273 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 LAMP5Q9UJQ1 280 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 ORC6Q9Y5N6 252 aa12.99□□□□□ -0.33
TRIM47-206ENST00000592942 LOC100130705A0A1B0GUX0 176 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 H0YL77 283 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 PSMD9O00233 223 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 SLC16A6O15403 523 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 MLNRO43193 412 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 CDC14BO60729 498 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 ENTPD6O75354 484 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 TACSTD2P09758 323 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 H2BFMP0C1H6 154 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 ACHEP22303 614 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 USF1P22415 310 aaPredicted RBP12.98□□□□□ -0.33
TRIM47-206ENST00000592942 TMEM33P57088 247 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 CDC42P60953 191 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 ROM1Q03395 351 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 CLEC9AQ6UXN8 241 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 PGAP1Q75T13 922 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 RDH12Q96NR8 316 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 DIRC2Q96SL1 478 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 CNN2Q99439 309 aaKnown RBP12.98□□□□□ -0.33
TRIM47-206ENST00000592942 PIMREGQ9BSJ6 248 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 CHODLQ9H9P2 273 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 ZNF275Q9NSD4 429 aaPredicted RBP12.98□□□□□ -0.33
TRIM47-206ENST00000592942 DECR2Q9NUI1 292 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 WARS2Q9UGM6 360 aaKnown RBP12.98□□□□□ -0.33
TRIM47-206ENST00000592942 LRP12Q9Y561 859 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 N6AMT1Q9Y5N5 214 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 ABCA1O95477 2261 aa12.98□□□□□ -0.33
TRIM47-206ENST00000592942 IGHV1-69-2A0A0G2JMI3 117 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 CD300LBA8K4G0 201 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 WNT9BO14905 357 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 MAGEB4O15481 346 aaPredicted RBP12.97□□□□□ -0.33
TRIM47-206ENST00000592942 HSD11B1P28845 292 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 FAM3AP98173 230 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 MALLQ13021 153 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 OCLNQ16625 522 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 DEGS2Q6QHC5 323 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 Q71RC1 249 aaPredicted RBP12.97□□□□□ -0.33
TRIM47-206ENST00000592942 FAM57BQ71RH2 274 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 SSX6Q7RTT6 188 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 SLC35F2Q8IXU6 374 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 GALNT4Q8N4A0 578 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 ZNF540Q8NDQ6 660 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 OR2Z1Q8NG97 314 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 OR13G1Q8NGZ3 307 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 RHOXF1Q8NHV9 184 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 OR8B4Q96RC9 309 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 CLN6Q9NWW5 311 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 GMPPBQ9Y5P6 360 aa12.97□□□□□ -0.33
TRIM47-206ENST00000592942 J3QRE1 110 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 SRSF10O75494 262 aaKnown RBP12.96□□□□□ -0.33
TRIM47-206ENST00000592942 APOL3O95236 402 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 APOC1P02654 83 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 HLA-DPB1P04440 258 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 HEXAP06865 529 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 ANXA2P07355 339 aaKnown RBP12.96□□□□□ -0.33
TRIM47-206ENST00000592942 SELEP16581 610 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 DCTDP32321 178 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 CXCR4P61073 352 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 TNFAIP6P98066 277 aaPredicted RBP12.96□□□□□ -0.33
TRIM47-206ENST00000592942 TMED1Q13445 227 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 TMEM249Q2WGJ8 235 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 ZMAT1Q5H9K5 638 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 ZNF684Q5T5D7 378 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 MRPL21Q7Z2W9 205 aaKnown RBP12.96□□□□□ -0.33
TRIM47-206ENST00000592942 KRT77Q7Z794 578 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.96□□□□□ -0.33
TRIM47-206ENST00000592942 ENTHD1Q8IYW4 607 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 ZNF679Q8IYX0 411 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 BHLHE23Q8NDY6 225 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 OR51G2Q8NGK0 314 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 ASB17Q8WXJ9 295 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 PPP1R14AQ96A00 147 aa12.96□□□□□ -0.33
TRIM47-206ENST00000592942 ELMOD3Q96FG2 381 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms