RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PAQR4Q8N4S7 273 aaPredicted RBP8□□□□□ -1.13
BRCA1-226ENST00000591534 SPICQ8N5J4 248 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 LRRC17Q8N6Y2 441 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 NOXO1Q8NFA2 376 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 FGFBP3Q8TAT2 258 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 IPCEF1Q8WWN9 437 aaPredicted RBP8□□□□□ -1.13
BRCA1-226ENST00000591534 RBP7Q96R05 134 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 SLC6A7Q99884 636 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 FUZQ9BT04 418 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 ZNF747Q9BV97 191 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 TOR3AQ9H497 397 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 RIBC2Q9H4K1 309 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 BATF3Q9NR55 127 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 TUBG2Q9NRH3 451 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 INIPQ9NRY2 104 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 CLN6Q9NWW5 311 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 IL20Q9NYY1 176 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 H2AFY2Q9P0M6 372 aaPredicted RBP8□□□□□ -1.13
BRCA1-226ENST00000591534 MYRFQ9Y2G1 1151 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 PCDHGB1Q9Y5G3 927 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 CDH10Q9Y6N8 788 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 TRBV4-1A0A0J9YWV2 114 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 C5orf49A4QMS7 147 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 NPIPB13A6NJU9 1138 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 RIIAD1A6NNX1 92 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 NOTOA8MTQ0 251 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 C22orf46C9J442 243 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 NPIPB4C9JG80 1138 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 J3KTA2 159 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 IMPA2O14732 288 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 SURF4O15260 269 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 GASTP01350 101 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 IGHV1-46P01743 117 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 ADH4P08319 380 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 CCDC159P0C7I6 412 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 ZNF3P17036 446 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 TNFRSF1AP19438 455 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 FUT1P19526 365 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 CPT2P23786 658 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 DAPP51397 102 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 UBA52P62987 128 aaKnown RBP7.99□□□□□ -1.13
BRCA1-226ENST00000591534 GLO1Q04760 184 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 SGCAQ16586 387 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 ZBED5Q49AG3 693 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 TMEM177Q53S58 311 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 ARMCX4Q5H9R4 360 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 PRR31Q5SQ13 230 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 SLC25A30Q5SVS4 291 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 THEM4Q5T1C6 240 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 C10orf128Q5T292 105 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 SMARCD3Q6STE5 483 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 DPY19L2P2Q6ZN68 376 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 EGFL6Q8IUX8 553 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 NRMQ8IXM6 262 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 Q8N3U1 123 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 SYT14Q8NB59 555 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 PFN4Q8NHR9 129 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 HDAC2Q92769 488 aaKnown RBP7.99□□□□□ -1.13
BRCA1-226ENST00000591534 COG8Q96MW5 612 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 TSPAN32Q96QS1 320 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 PITX2Q99697 317 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 SLC29A1Q99808 456 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 WACQ9BTA9 647 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 MRI1Q9BV20 369 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 MRPL13Q9BYD1 178 aaKnown RBP7.99□□□□□ -1.13
BRCA1-226ENST00000591534 FN3KQ9H479 309 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 ZNF696Q9H7X3 374 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 SLC25A19Q9HC21 320 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 MEPEQ9NQ76 525 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-226ENST00000591534 MAN2C1Q9NTJ4 1040 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 TBC1D23Q9NUY8 699 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 UBAP1Q9NZ09 502 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 RHCGQ9UBD6 479 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 KLHL21Q9UJP4 597 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 NDRG4Q9ULP0 352 aaKnown RBP7.99□□□□□ -1.13
BRCA1-226ENST00000591534 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.99□□□□□ -1.13
BRCA1-226ENST00000591534 TIMM10BQ9Y5J6 103 aa7.99□□□□□ -1.13
BRCA1-226ENST00000591534 PIP5K1CO60331 668 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 TRMUO75648 421 aaKnown RBP7.98□□□□□ -1.13
BRCA1-226ENST00000591534 OR7A10O76100 309 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 CD55P08174 381 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 MMP7P09237 267 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-226ENST00000591534 HKR1P10072 659 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 PRTN3P24158 256 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 GGT2P36268 569 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 OMPP47874 163 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 MMP15P51511 669 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 ZNF133P52736 654 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-226ENST00000591534 GABARAPL2P60520 117 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 ERVS71-1P61550 626 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 ADARB1P78563 741 aaKnown RBP7.98□□□□□ -1.13
BRCA1-226ENST00000591534 LCN2P80188 198 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 IL5RAQ01344 420 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 RPL18Q07020 188 aaKnown RBP7.98□□□□□ -1.13
BRCA1-226ENST00000591534 CD47Q08722 323 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 KCTD21Q4G0X4 260 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 FAM27BQ5VT28 67 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 ZNF691Q5VV52 312 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 ZNF620Q6ZNG0 422 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 TSEN54Q7Z6J9 526 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms