RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 CALB2P22676 271 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 CA6P23280 308 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 KDELR2P33947 212 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 MNAT1P51948 309 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 HIST1H3AP68431 136 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 PRB3Q04118 309 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-216ENST00000591275 DBPQ10586 325 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-216ENST00000591275 POU4F2Q12837 409 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 HIST2H3PS2Q5TEC6 136 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 ERICH5Q6P6B1 374 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 COLCA1Q6ZS62 124 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 HIST2H3AQ71DI3 136 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 VMO1Q7Z5L0 202 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 NAA40Q86UY6 237 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 FGFRL1Q8N441 504 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 FAM156AQ8NDB6 213 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 OR8J3Q8NGG0 315 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 SPRYD4Q8WW59 207 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-216ENST00000591275 ACOT11Q8WXI4 607 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-216ENST00000591275 SLCO4A1Q96BD0 722 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 TSSK2Q96PF2 358 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 SH3GL1Q99961 368 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 NMNAT1Q9HAN9 279 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-216ENST00000591275 VPREB3Q9UKI3 123 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 CAPN7Q9Y6W3 813 aa13.11□□□□□ -0.31
DDX39A-216ENST00000591275 OOEPA6NGQ2 149 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 F5H5K5 113 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 H0YHG0 523 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 DVL1O14640 695 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 TSPAN9O75954 239 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 ACSM4P0C7M7 580 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 PRDX6P30041 224 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 SDHAP31040 664 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 SELENOWP63302 87 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 RIPK1Q13546 671 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 KCNMB1Q16558 191 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 KPRPQ5T749 579 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-216ENST00000591275 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 PTCHD4Q6ZW05 846 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 MBOAT2Q6ZWT7 520 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 PGAP1Q75T13 922 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 VTCN1Q7Z7D3 282 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 ST8SIA4Q92187 359 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 RAB3IPQ96QF0 476 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-216ENST00000591275 ADAT1Q9BUB4 502 aaKnown RBP13.1□□□□□ -0.31
DDX39A-216ENST00000591275 C1orf21Q9H246 121 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 VSX1Q9NZR4 365 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-216ENST00000591275 DNAJB11Q9UBS4 358 aa13.1□□□□□ -0.31
DDX39A-216ENST00000591275 IGHV3OR15-7A0A075B7D8 119 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 TRAV38-1A0A0B4J264 116 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 A0A1W2PRD5 423 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 A0A1W2PRF3 423 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 A0A1W2PRM7 423 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 BTBD17A6NE02 478 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 DCTN6O00399 190 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 OPN1MWP04001 364 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 LCATP04180 440 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 IFNW1P05000 195 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 OPN1MW2P0DN77 364 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 OPN1MW3P0DN78 364 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 CFAP77Q6ZQR2 320 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 ZNF826PQ6ZT77 177 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 TMPRSS11FQ6ZWK6 438 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 FAM90A1Q86YD7 464 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 LINC00346Q8IVM7 164 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 RNF113BQ8IZP6 322 aaKnown RBP13.09□□□□□ -0.31
DDX39A-216ENST00000591275 C11orf44Q8N8P7 122 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 LZICQ8WZA0 190 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 FAM46AQ96IP4 442 aaKnown RBP13.09□□□□□ -0.31
DDX39A-216ENST00000591275 PITX2Q99697 317 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 NDEL1Q9GZM8 345 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 C1orf123Q9NWV4 160 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 ZNRD1Q9P1U0 126 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 ONECUT1Q9UBC0 465 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 SIGLEC9Q9Y336 463 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 IER3IP1Q9Y5U9 82 aa13.09□□□□□ -0.31
DDX39A-216ENST00000591275 A0A1B0GW55 424 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 ANKRD61A6NGH8 418 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 NDUFB2O95178 105 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 FBP1P09467 338 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 DUX4L2P0CJ85 424 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 DUX4L3P0CJ86 424 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 DUX4L4P0CJ87 422 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 DUX4L5P0CJ88 424 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 DUX4L6P0CJ89 424 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 DUX4L7P0CJ90 424 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 TGFBR2P37173 567 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 CDKN2AP42771 156 aaKnown RBP13.08□□□□□ -0.32
DDX39A-216ENST00000591275 DLX1P56177 255 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 ELF3P78545 371 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-216ENST00000591275 MALLQ13021 153 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 KRTAP27-1Q3LI81 207 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 CDONQ4KMG0 1287 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 GPR139Q6DWJ6 353 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 SLC35E4Q6ICL7 350 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 DUX4L9Q6RFH8 374 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-216ENST00000591275 Q6ZTK2 550 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 RRM2BQ7LG56 351 aa13.08□□□□□ -0.32
DDX39A-216ENST00000591275 MRPL21Q7Z2W9 205 aaKnown RBP13.08□□□□□ -0.32
DDX39A-216ENST00000591275 ADCK1Q86TW2 530 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms