RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 LIPNQ5VXI9 398 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 FBXW12Q6X9E4 464 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 OR8B12Q8NGG6 310 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 PIGTQ969N2 578 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 JAM3Q9BX67 310 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 Q9H521 79 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 TAAR3PQ9P1P4 343 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 EDARQ9UNE0 448 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 R4GMQ9 66 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 OVOL3O00110 214 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 LIMS3P0CW19 117 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 LIMS4P0CW20 117 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 DCKP27707 260 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 ALDH3B1P43353 468 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 OR12D2P58182 307 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 SELENOVP59797 346 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 ZNF92Q03936 586 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 ST3GAL4Q11206 333 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 GFOD2Q3B7J2 385 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 FAM220AQ7Z4H9 259 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 ZNF540Q8NDQ6 660 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 OR52H1Q8NGJ2 320 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 NINJ1Q92982 152 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 TMEM80Q96HE8 168 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 C4orf36Q96KX1 117 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 CXorf56Q9H5V9 222 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 SP140LQ9H930 580 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 FKBP14Q9NWM8 211 aa16.24■□□□□ 0.19
CLPTM1-209ENST00000588855 VPS13CQ709C8 3753 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 LOC110117498-PIK3R3F6TDL0 507 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 J3QLW9 94 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 DENRO43583 198 aaKnown RBP16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 RAC2P15153 192 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 ZNF19P17023 458 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 ETV1P50549 477 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 MMP16P51512 607 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 ACTA2P62736 377 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 ACTG2P63267 376 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 TIGD6Q17RP2 521 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 NKPD1Q17RQ9 610 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 GTF3AQ92664 365 aaKnown RBP16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 SGK3Q96BR1 496 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 HAVCR1Q96D42 359 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 SIGLEC11Q96RL6 698 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 PBOV1Q9GZY1 135 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 OR10A2Q9H208 303 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 ISG20L2Q9H9L3 353 aaKnown RBP16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 DYNLRB1Q9NP97 96 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 UBAP1Q9NZ09 502 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 PURGQ9UJV8 347 aaKnown RBP16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 GTF2A1LQ9UNN4 478 aa16.23■□□□□ 0.19
CLPTM1-209ENST00000588855 TEX15Q9BXT5 2789 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 M0R233 179 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 XRCC2O43543 280 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 TIMM8AO60220 97 aaPredicted RBP16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 KITLGP21583 273 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 PSMB10P40306 273 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 CSNK2BP67870 215 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 OR2T2Q6IF00 324 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 PGAP1Q75T13 922 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 MRPL21Q7Z2W9 205 aaKnown RBP16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 ZCCHC24Q8N2G6 241 aaKnown RBP16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 SGCDQ92629 289 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 RORBQ92753 470 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 PPP1R14AQ96A00 147 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 RNF166Q96A37 237 aaPredicted RBP16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 SPSB4Q96A44 273 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 REEP6Q96HR9 211 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 G6PC2Q9NQR9 355 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 PAK1IP1Q9NWT1 392 aaPredicted RBP16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 SCN3BQ9NY72 215 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 NUFIP1Q9UHK0 495 aaKnown RBP16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 EXOSC1Q9Y3B2 195 aaKnown RBP16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 PMF1-BGLAPU3KQ54 211 aa16.22■□□□□ 0.19
CLPTM1-209ENST00000588855 CCDC168Q8NDH2 2452 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 PTGES3LE9PB15 166 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 MYL12AP19105 171 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 PPOXP50336 477 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 MMP15P51511 669 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 DEFB113Q30KQ7 82 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 KCTD20Q7Z5Y7 419 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 OR5AS1Q8N127 324 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 SYS1Q8N2H4 156 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 ZNF786Q8N393 782 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 STX19Q8N4C7 294 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 MBD6Q96DN6 1003 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 PELI1Q96FA3 418 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 MRPL48Q96GC5 212 aaKnown RBP16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 REPIN1Q9BWE0 567 aaKnown RBP16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 MOB1AQ9H8S9 216 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 CLEC2DQ9UHP7 191 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 OR52A1Q9UKL2 312 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 ARID1AO14497 2285 aa16.21■□□□□ 0.19
CLPTM1-209ENST00000588855 ACOD1A6NK06 481 aa16.2■□□□□ 0.18
CLPTM1-209ENST00000588855 H7C417 338 aa16.2■□□□□ 0.18
CLPTM1-209ENST00000588855 TTRP02766 147 aa16.2■□□□□ 0.18
CLPTM1-209ENST00000588855 TACSTD2P09758 323 aa16.2■□□□□ 0.18
CLPTM1-209ENST00000588855 CCDC159P0C7I6 412 aa16.2■□□□□ 0.18
CLPTM1-209ENST00000588855 NAT2P11245 290 aa16.2■□□□□ 0.18
CLPTM1-209ENST00000588855 BMP4P12644 408 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms