RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 OPN4Q9UHM6 478 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 MRPS17Q9Y2R5 130 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 CSAG2Q9Y5P2 127 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 FANCMQ8IYD8 2048 aa12.33□□□□□ -0.44
CACNA1A-209ENST00000587525 A0A0G2JK05 382 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 OR6C65A6NJZ3 312 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 BCAT2O15382 392 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 OGG1O15527 345 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 IFNA21P01568 189 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 IGHV4-34P06331 123 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 TUBG1P23258 451 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 RSU1Q15404 277 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 ELAVL1Q15717 326 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 STPG1Q5TH74 334 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 PTPMT1Q8WUK0 201 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 C11orf40Q8WZ69 217 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 XRCC3O43542 346 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 NDUFB6O95139 128 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 QDPRP09417 244 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 NQO2P16083 231 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 FAHP16930 419 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 LAP3P28838 519 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 SLC26A5P58743 744 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 FLI1Q01543 452 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 SLC35D3Q5M8T2 416 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 RNLSQ5VYX0 342 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 RTL10Q7L3V2 364 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 ADGRE4PQ86SQ3 457 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 YRDCQ86U90 279 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 HSD17B11Q8NBQ5 300 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 SLC26A10Q8NG04 563 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 OR10G3Q8NGC4 313 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 STK35Q8TDR2 534 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 PIGCQ92535 297 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 OR8B4Q96RC9 309 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 HEXA-AS1Q9H8Q6 139 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 OBP2AQ9NY56 170 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 MEGF11A6BM72 1044 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 APOC1P02654 83 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 DHRS2Q13268 280 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 PPP1R1AQ13522 171 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 TGIF1Q15583 401 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 H1FNTQ75WM6 255 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 SLC25A28Q96A46 364 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 SULT4A1Q9BR01 284 aa12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 DUSP15Q9H1R2 295 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-209ENST00000587525 OR7C1O76099 320 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 DIRAS3O95661 229 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 IL33O95760 270 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 WNT11O96014 354 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 LINC00271P0C7V0 271 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 DUSP1P28562 367 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 RPS27AP62979 156 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 UBA52P62987 128 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 MGAT2Q10469 447 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 ZNF529Q6P280 563 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 NAA40Q86UY6 237 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 OR2AE1Q8NHA4 323 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 GPBAR1Q8TDU6 330 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 ROBO4Q8WZ75 1007 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 SMOC1Q9H4F8 434 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 IFT22Q9H7X7 185 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 GPR173Q9NS66 373 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 KCNMB2Q9Y691 235 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 FNDC1Q4ZHG4 1894 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 ZNF407Q9C0G0 2248 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 CFAP54Q96N23 3096 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 ARPC3O15145 178 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 XRCC2O43543 280 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 ZNF354AO60765 605 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 CNOT4O95628 575 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 TSPAN15O95858 294 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 CNR1P21554 472 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 GNRHRP30968 328 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 MTCP1P56278 107 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 GRINAQ7Z429 371 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 OR4D6Q8NGJ1 314 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 OR52N5Q8NH56 324 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 HOXB13Q92826 284 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 NICN1Q9BSH3 213 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 SULT1C2O00338 296 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 BET1O15155 118 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 KLF4O43474 513 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 PNLIPP16233 465 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 S100A2P29034 98 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 C9orf152Q5JTZ5 239 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 IL1F10Q8WWZ1 152 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 CNTD2Q9H8S5 307 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 NXT1Q9UKK6 140 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 HS3ST3A1Q9Y663 406 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 DOCK10Q96BY6 2186 aa12.31□□□□□ -0.44
CACNA1A-209ENST00000587525 C9J4A7 227 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 H7C417 338 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 SNAPINO95295 136 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 WISP1O95388 367 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 OR13C7P0DN81 318 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 SPP1P10451 314 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 TPT1P13693 172 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 DPP4P27487 766 aa12.3□□□□□ -0.44
CACNA1A-209ENST00000587525 CD96P40200 585 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms