RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 SIGLEC7Q9Y286 467 aa9.67□□□□□ -0.86
LIG3-207ENST00000586119 RRP15Q9Y3B9 282 aaKnown RBP9.67□□□□□ -0.86
LIG3-207ENST00000586119 C5orf63A6NC05 138 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 IQCF6A8MYZ5 107 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 FAM20BO75063 409 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 FKBP6O75344 327 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 FCN3O75636 299 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 GADD45GO95257 159 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 PPIAL4GP0DN37 164 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 FCGR1AP12314 374 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 FPR3P25089 353 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 PITPNBP48739 271 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 SRP9P49458 86 aaKnown RBP9.66□□□□□ -0.86
LIG3-207ENST00000586119 LSM6P62312 80 aaKnown RBP9.66□□□□□ -0.86
LIG3-207ENST00000586119 HIST1H3AP68431 136 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 KPNB1Q14974 876 aaKnown RBP9.66□□□□□ -0.86
LIG3-207ENST00000586119 SEC23BQ15437 767 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 ANKDD1AQ495B1 522 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 CLEC12AQ5QGZ9 265 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 HIST2H3PS2Q5TEC6 136 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 SFRP4Q6FHJ7 346 aaPredicted RBP9.66□□□□□ -0.86
LIG3-207ENST00000586119 OR2T5Q6IEZ7 315 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 HIST2H3AQ71DI3 136 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 RHOUQ7L0Q8 258 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 RRM2BQ7LG56 351 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 LINC00346Q8IVM7 164 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 GLB1L2Q8IW92 636 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 LINC00471Q8N535 108 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 OR8B3Q8NGG8 313 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 OR2T29Q8NH02 315 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 SLC7A13Q8TCU3 470 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 WFDC12Q8WWY7 111 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 OR8B2Q96RD0 313 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 PCGF1Q9BSM1 259 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 SRA1Q9HD15 236 aaKnown RBP9.66□□□□□ -0.86
LIG3-207ENST00000586119 KRCC1Q9NPI7 259 aaPredicted RBP9.66□□□□□ -0.86
LIG3-207ENST00000586119 TMEM100Q9NV29 134 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 VSX1Q9NZR4 365 aaPredicted RBP9.66□□□□□ -0.86
LIG3-207ENST00000586119 CTSZQ9UBR2 303 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 AP4S1Q9Y587 144 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 MMP24Q9Y5R2 645 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 NOTCH1P46531 2555 aa9.66□□□□□ -0.86
LIG3-207ENST00000586119 SRRM5B3KS81 715 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 AHCYL1O43865 530 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 DIRAS1O95057 198 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 KNG1P01042 644 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 MELTFP08582 738 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 SDHAP31040 664 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 RRM2P31350 389 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 IFNGR2P38484 337 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 OMPP47874 163 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 RAG2P55895 527 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 SPIBQ01892 262 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 POU4F2Q12837 409 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 KCNMB1Q16558 191 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 CFAP77Q6ZQR2 320 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 OR6V1Q8N148 313 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 FGFRL1Q8N441 504 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 BOLLQ8N9W6 283 aaKnown RBP9.65□□□□□ -0.86
LIG3-207ENST00000586119 OR5L1Q8NGL2 311 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 APOBEC3DQ96AK3 386 aaPredicted RBP9.65□□□□□ -0.86
LIG3-207ENST00000586119 SLCO4A1Q96BD0 722 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 PLEKHA8Q96JA3 519 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 COG8Q96MW5 612 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 TBX15Q96SF7 602 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 REEP1Q9H902 201 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 DNAJB9Q9UBS3 223 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 CLN8Q9UBY8 286 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 B9D1Q9UPM9 204 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 TMEM5Q9Y2B1 443 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 POLR1DQ9Y2S0 133 aa9.65□□□□□ -0.86
LIG3-207ENST00000586119 IGLV1-36A0A0B4J1U3 117 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 TRBV4-1A0A0J9YWV2 114 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 CENPVL3A0A0U1RRI6 287 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 A0A1B0GWJ7 208 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 F5H5K5 113 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 TNFRSF11BO00300 401 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 GNGT2O14610 69 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 TNFRSF13BO14836 293 aaPredicted RBP9.64□□□□□ -0.87
LIG3-207ENST00000586119 NDUFB2O95178 105 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 PPP1R3DO95685 299 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 CST1P01037 141 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 ACSM4P0C7M7 580 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 MMP9P14780 707 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 FASP25445 335 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 CFHR2P36980 270 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 PSMB10P40306 273 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 RGS6P49758 472 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 RAD23AP54725 363 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 ELF3P78545 371 aaPredicted RBP9.64□□□□□ -0.87
LIG3-207ENST00000586119 PRB3Q04118 309 aaPredicted RBP9.64□□□□□ -0.87
LIG3-207ENST00000586119 GK2Q14410 553 aaPredicted RBP9.64□□□□□ -0.87
LIG3-207ENST00000586119 ZNF181Q2M3W8 571 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 KRTAP27-1Q3LI81 207 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 FGD3Q5JSP0 725 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 OLFML2AQ68BL7 652 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 COLCA1Q6ZS62 124 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 PDZD9Q8IXQ8 264 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 GJC3Q8NFK1 279 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 OR52J3Q8NH60 311 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms