RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 SGCAQ16586 387 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 TMEM255AQ5JRV8 349 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 HIST2H3PS2Q5TEC6 136 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 TMPRSS11AQ6ZMR5 421 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 HIST2H3AQ71DI3 136 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 MEPCEQ7L2J0 689 aaKnown RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 ZBTB46Q86UZ6 589 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 LRP11Q86VZ4 500 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 GLB1L2Q8IW92 636 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 ZNF101Q8IZC7 436 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 AKR7LQ8NHP1 331 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 MCFD2Q8NI22 146 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 FAM168AQ92567 244 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 RPL3LQ92901 407 aaKnown RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 MRPL48Q96GC5 212 aaKnown RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 POM121Q96HA1 1249 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 ERMAPQ96PL5 475 aaPredicted RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 DDOQ99489 341 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 CHCHD6Q9BRQ6 235 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 BCL2L14Q9BZR8 327 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 SLIRPQ9GZT3 109 aaKnown RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 KCNN2Q9H2S1 579 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 CDH20Q9HBT6 801 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 EMC7Q9NPA0 242 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 HINT3Q9NQE9 182 aaKnown RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 ATPIF1Q9UII2 106 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 SSR3Q9UNL2 185 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 EXOGQ9Y2C4 368 aaKnown RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 TIMM10BQ9Y5J6 103 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 CSPG4Q6UVK1 2322 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 MALRD1Q5VYJ5 2156 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 PNMA8CA0A1B0GUJ8 204 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 LOC390937A0A1W2PQ73 354 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 OR6C68A6NDL8 312 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 OR6C6A6NF89 314 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 METTL15A6NJ78 407 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 SLC16A7O60669 478 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 KHDRBS3O75525 346 aaKnown RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 IGHV3-13P01766 116 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 FAM157BP0CG42 384 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 GALP22466 123 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 CRABP1P29762 137 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 GABRA5P31644 462 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 OPRL1P41146 370 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 RAD52P43351 418 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 PDLIM4P50479 330 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 BMXP51813 675 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 TAS2R43P59537 309 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 SCRN3Q0VDG4 424 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 TPBGQ13641 420 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 SSX1Q16384 188 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 KRTAP21-3Q3LHN1 58 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 ZNF362Q5T0B9 420 aaPredicted RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 RGS7BPQ6MZT1 257 aaPredicted RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 ZNF774Q6NX45 483 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 PLBD1Q6P4A8 553 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 DNM1P34Q6PK57 102 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 RFPL4BQ6ZWI9 263 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 VASH1Q7L8A9 365 aaPredicted RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 BCDIN3DQ7Z5W3 292 aaKnown RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 CPOQ8IVL8 374 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 C1orf174Q8IYL3 243 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 OR6V1Q8N148 313 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 ZCCHC24Q8N2G6 241 aaKnown RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 ACBD7Q8N6N7 88 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 MAPK1IP1LQ8NDC0 245 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 SLC26A10Q8NG04 563 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 OR6Q1Q8NGQ2 317 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 NEU4Q8WWR8 484 aaPredicted RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 MARS2Q96GW9 593 aaKnown RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 TSSK2Q96PF2 358 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 NMNAT3Q96T66 252 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 VRK1Q99986 396 aaPredicted RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 SYT3Q9BQG1 590 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 RAB1BQ9H0U4 201 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 OR51E2Q9H255 320 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 DYNLRB1Q9NP97 96 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 EXOSC4Q9NPD3 245 aaKnown RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 AKIP1Q9NQ31 210 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 HAO2Q9NYQ3 351 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 CLEC2DQ9UHP7 191 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 GSTK1Q9Y2Q3 226 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 COA3Q9Y2R0 106 aaPredicted RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 CAB39Q9Y376 341 aaPredicted RBP7.39□□□□□ -1.23
ATG4D-202ENST00000585437 PEX16Q9Y5Y5 336 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 LHFPL6Q9Y693 200 aa7.39□□□□□ -1.23
ATG4D-202ENST00000585437 HIVEP2P31629 2446 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 A0A075B6Q4 140 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 C5orf49A4QMS7 147 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 ZNF670-ZNF695F2Z2N8 137 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 J3QW42 95 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 SGCEO43556 437 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 CD5LO43866 347 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 DOK2O60496 412 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 NCR1O76036 304 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 MPZL1O95297 269 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 ADRA2AP08913 450 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 CD40LGP29965 261 aa7.38□□□□□ -1.23
ATG4D-202ENST00000585437 GUCA1AP43080 201 aaPredicted RBP7.38□□□□□ -1.23
ATG4D-202ENST00000585437 NR4A2P43354 598 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms