RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ATP6V1G2-DDX39BF2Z307 99 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SULT2B1O00204 365 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 DUS4LO95620 317 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 GP1BAP07359 652 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 BIDP55957 195 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FOXL2P58012 376 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SNTB1Q13884 538 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 TMEM17Q86X19 198 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 APCDD1LQ8NCL9 501 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ADAD2Q8NCV1 583 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR13C9Q8NGT0 318 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR10R2Q8NGX6 335 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 EMC6Q9BV81 110 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SELENOIQ9C0D9 397 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FN3KRPQ9HA64 309 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 EXPH5Q8NEV8 1989 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 DBX1A6NMT0 343 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 YKT6O15498 198 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 DUX1O43812 170 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SSX5O60225 188 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 HOXB1P14653 301 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 VAMP1P23763 118 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PPIAP62937 165 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 INPP5JQ15735 1006 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ANGPTL5Q86XS5 388 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 MRPL13Q9BYD1 178 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SERINC1Q9NRX5 453 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ALKBH4Q9NXW9 302 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PISDQ9UG56 409 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 RPH3AQ9Y2J0 694 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ASXL3Q9C0F0 2248 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 VSTM2BA6NLU5 285 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 IFNA6P05013 189 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FOSL2P15408 326 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 AKR1C4P17516 323 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ZNF93P35789 620 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FOXF1Q12946 379 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 AWAT2Q6E213 333 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 INO80EQ8NBZ0 244 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CASTOR1Q8WTX7 329 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FBXW5Q969U6 566 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ZNF501Q96CX3 271 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 LRRC46Q96FV0 321 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FGF21Q9NSA1 209 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 B3GAT1Q9P2W7 334 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 MBD2Q9UBB5 411 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PHF3Q92576 2039 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 A0A1W2PNV4 684 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 H3BML4 177 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 DNASE2O00115 360 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 LAP3P28838 519 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 NXPH1P58417 271 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 COX15Q7KZN9 410 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 KCTD9Q7L273 389 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 HOGA1Q86XE5 327 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 BPIFCQ8NFQ6 507 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SLC22A8Q8TCC7 542 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 THAP3Q8WTV1 239 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PMEPA1Q969W9 287 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PIGMQ9H3S5 423 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SLC22A11Q9NSA0 550 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 UNC13CQ8NB66 2214 aa12.6□□□□□ -0.39
CDK5RAP3-237ENST00000585163 F5H0A9 414 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ETV2O00321 342 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CRHP06850 196 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CHRM2P08172 466 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 THEM4Q5T1C6 240 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PTCRAQ6ISU1 281 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 RTN4RL2Q86UN3 420 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR51E1Q8TCB6 317 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 STT3BQ8TCJ2 826 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 INTS12Q96CB8 462 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 MESP1Q9BRJ9 268 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 NICN1Q9BSH3 213 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 TGIF2Q9GZN2 237 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 LPAR5Q9H1C0 372 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 HRH3Q9Y5N1 445 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 MPTX1A8MV57 137 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 EEF1E1-BLOC1S5C9J1V9 151 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SIGLEC5O15389 551 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 EFNA2O43921 213 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PIAS2O75928 621 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PMP2P02689 132 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PSMB6P28072 239 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 EMP2P54851 167 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FOXK1P85037 733 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 MC2RQ01718 297 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SIGLEC14Q08ET2 396 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 NFAM1Q8NET5 270 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 TMEM185AQ8NFB2 350 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR4K15Q8NH41 348 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 NUDT22Q9BRQ3 303 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 MOB1AQ9H8S9 216 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 LHFPL6Q9Y693 200 aa12.59□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SHISA8B8ZZ34 492 aa12.58□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TAS2R31P59538 309 aa12.58□□□□□ -0.4
CDK5RAP3-237ENST00000585163 DEFA5Q01523 94 aa12.58□□□□□ -0.4
CDK5RAP3-237ENST00000585163 UQCC3Q6UW78 93 aa12.58□□□□□ -0.4
CDK5RAP3-237ENST00000585163 RNF144BQ7Z419 303 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms