RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 STX19Q8N4C7 294 aa11.91□□□□□ -0.5
TRAF4-215ENST00000584944 CMBLQ96DG6 245 aa11.91□□□□□ -0.5
TRAF4-215ENST00000584944 MARS2Q96GW9 593 aaKnown RBP11.91□□□□□ -0.5
TRAF4-215ENST00000584944 TRAF4Q9BUZ4 470 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-215ENST00000584944 C1QTNF5Q9BXJ0 243 aa11.91□□□□□ -0.5
TRAF4-215ENST00000584944 OPA3Q9H6K4 179 aa11.91□□□□□ -0.5
TRAF4-215ENST00000584944 BARX1Q9HBU1 254 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-215ENST00000584944 CADP27708 2225 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 LOC110117498-PIK3R3F6TDL0 507 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 WBP4O75554 376 aaKnown RBP11.9□□□□□ -0.5
TRAF4-215ENST00000584944 SULT1C4O75897 302 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 ADRA2AP08913 450 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 RAC2P15153 192 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 ZNF250P15622 560 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 CD53P19397 219 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 TNFSF4P23510 183 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 DCKP27707 260 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 CDKN1AP38936 164 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 ATP5J2P56134 94 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 HLXQ14774 488 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-215ENST00000584944 DEFB113Q30KQ7 82 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 ALKBH6Q3KRA9 238 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 USP51Q70EK9 711 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 FTMTQ8N4E7 242 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 ZNF540Q8NDQ6 660 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 APH1BQ8WW43 257 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 MYDGFQ969H8 173 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 PERPQ96FX8 193 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 TMEM80Q96HE8 168 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 ANKRD60Q9BZ19 345 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 RGCCQ9H4X1 137 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 MOB1AQ9H8S9 216 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 CGGBP1Q9UFW8 167 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-215ENST00000584944 BLOC1S6Q9UL45 172 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 COPS3Q9UNS2 423 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 EXOGQ9Y2C4 368 aaKnown RBP11.9□□□□□ -0.5
TRAF4-215ENST00000584944 TPRKBQ9Y3C4 175 aa11.9□□□□□ -0.5
TRAF4-215ENST00000584944 ACOD1A6NK06 481 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 J3QLW9 94 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 CLPTM1O96005 669 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 IGHV3-13P01766 116 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 FOSL1P15407 271 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 ZNF19P17023 458 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 MYF6P23409 242 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 OTX1P32242 354 aaPredicted RBP11.89□□□□□ -0.51
TRAF4-215ENST00000584944 DCTDP32321 178 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 MPV17P39210 176 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 ALDH3B1P43353 468 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 PPOXP50336 477 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 TP53I3Q53FA7 332 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 AHSA2Q719I0 299 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 LHFPL3Q86UP9 236 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 NAA40Q86UY6 237 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 LRP11Q86VZ4 500 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 BHLHE23Q8NDY6 225 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 OR52I1Q8NGK6 324 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 REEP6Q96HR9 211 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 ALG8Q9BVK2 526 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 GSX1Q9H4S2 264 aaPredicted RBP11.89□□□□□ -0.51
TRAF4-215ENST00000584944 DECR2Q9NUI1 292 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 ZNF391Q9UJN7 358 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 EXOSC1Q9Y3B2 195 aaKnown RBP11.89□□□□□ -0.51
TRAF4-215ENST00000584944 NOP16Q9Y3C1 178 aaKnown RBP11.89□□□□□ -0.51
TRAF4-215ENST00000584944 SNX5Q9Y5X3 404 aa11.89□□□□□ -0.51
TRAF4-215ENST00000584944 ROS1P08922 2347 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 PTGES3LE9PB15 166 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 EEF1B2P24534 225 aaKnown RBP11.88□□□□□ -0.51
TRAF4-215ENST00000584944 GNALP38405 381 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 ZNF81P51508 661 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 GBX2P52951 348 aaPredicted RBP11.88□□□□□ -0.51
TRAF4-215ENST00000584944 ST3GAL4Q11206 333 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 GALEQ14376 348 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 GK2Q14410 553 aaPredicted RBP11.88□□□□□ -0.51
TRAF4-215ENST00000584944 CARTPTQ16568 116 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 SWI5Q1ZZU3 235 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 RSPO1Q2MKA7 263 aaPredicted RBP11.88□□□□□ -0.51
TRAF4-215ENST00000584944 PCGF3Q3KNV8 242 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 SNAI3Q3KNW1 292 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 KRTAP27-1Q3LI81 207 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 GLYATL3Q5SZD4 288 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 FBXW12Q6X9E4 464 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 COLCA1Q6ZS62 124 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 OR5AS1Q8N127 324 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 ZNF786Q8N393 782 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 RFLNBQ8N5W9 214 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 OR2AE1Q8NHA4 323 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 HAVCR2Q8TDQ0 301 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 HAVCR1Q96D42 359 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 EGLN1Q9GZT9 426 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 CNOT2Q9NZN8 540 aaKnown RBP11.88□□□□□ -0.51
TRAF4-215ENST00000584944 PURGQ9UJV8 347 aaKnown RBP11.88□□□□□ -0.51
TRAF4-215ENST00000584944 MYRFQ9Y2G1 1151 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 R4GMQ9 66 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 ABCA2Q9BZC7 2435 aa11.88□□□□□ -0.51
TRAF4-215ENST00000584944 ANKRD30BLA7E2S9 258 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 H7C417 338 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 MYL12BO14950 172 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 MAGEB4O15481 346 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-215ENST00000584944 XPNPEP2O43895 674 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 MTRF1O75570 445 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms