RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	OR2AE1	Q8NHA4	323 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	OR5K1	Q8NHB7	308 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	RNF133	Q8WVZ7	376 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	OTULIN	Q96BN8	352 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	ZMYND19	Q96E35	227 aa	Predicted RBP	11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	MEGF10	Q96KG7	1140 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	AMELY	Q99218	206 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	GAL3ST1	Q99999	423 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	ABHD6	Q9BV23	337 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	OR51V1	Q9H2C8	321 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	LPAR2	Q9HBW0	351 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	GCM1	Q9NP62	436 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	CENPM	Q9NSP4	180 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	KIF17	Q9P2E2	1029 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	PPP1R3C	Q9UQK1	317 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	NPTN	Q9Y639	398 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	ANK2	Q01484	3957 aa		11.22	□□□□□ -0.61
SREBF1-223	ENST00000584760	SLC2A1	P11166	492 aa		11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	PCMT1	P22061	227 aa		11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	SRP14	P37108	136 aa	Known RBP	11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	PRKX	P51817	358 aa		11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	GRB2	P62993	217 aa	Known RBP	11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	EIF2B1	Q14232	305 aa	Known RBP	11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	SPATC1	Q76KD6	591 aa		11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	ASRGL1	Q7L266	308 aa		11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	PEG10	Q86TG7	708 aa	Known RBP	11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	CPO	Q8IVL8	374 aa		11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	BBS1	Q8NFJ9	593 aa		11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	GABARAPL1	Q9H0R8	117 aa		11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	HIF1AN	Q9NWT6	349 aa		11.21	□□□□□ -0.61
SREBF1-223	ENST00000584760	TRAV20	A0A0B4J274	112 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	ISPD	A4D126	451 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	CD300LB	A8K4G0	201 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760		F5H5P2	479 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	SELENOF	O60613	162 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	HLA-DPB1	P04440	258 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	FCGR1A	P12314	374 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	FAS	P25445	335 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	OPRL1	P41146	370 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	GATA4	P43694	442 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	SLC15A1	P46059	708 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	CX3CR1	P49238	355 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	SRP9	P49458	86 aa	Known RBP	11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	CRISP1	P54107	249 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	BTG1	P62324	171 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZMYND11	Q15326	602 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	TAF13	Q15543	124 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	SLC35D3	Q5M8T2	416 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	RHOU	Q7L0Q8	258 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	SHF	Q7M4L6	423 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	PRSS45	Q7RTY3	260 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	OTOS	Q8NHW6	89 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	SPSB4	Q96A44	273 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	TOR3A	Q9H497	397 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	OPA3	Q9H6K4	179 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	G6PC2	Q9NQR9	355 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	TMEM100	Q9NV29	134 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	AP4S1	Q9Y587	144 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	DOCK11	Q5JSL3	2073 aa		11.2	□□□□□ -0.62
SREBF1-223	ENST00000584760	CCDC182	A6NF36	153 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760		G3V2T6	193 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	TMEM178B	H3BS89	294 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	MITF	O75030	526 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	ANPEP	P15144	967 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	EPHA2	P29317	976 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	CD200	P41217	278 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	NAA10	P41227	235 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	RAD23A	P54725	363 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	ESRRG	P62508	458 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	MAB21L1	Q13394	359 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	PTGES3	Q15185	160 aa	Known RBP	11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZNF181	Q2M3W8	571 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	TMEM155	Q4W5P6	130 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	KLHL12	Q53G59	568 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	KDM4D	Q6B0I6	523 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	AMIGO2	Q86SJ2	522 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	LRTOMT	Q8WZ04	291 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	PLEKHA8	Q96JA3	519 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	TEX12	Q9BXU0	123 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	OCEL1	Q9H607	264 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	KRT84	Q9NSB2	600 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	UBAP1	Q9NZ09	502 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	KLHDC2	Q9Y2U9	406 aa		11.19	□□□□□ -0.62
SREBF1-223	ENST00000584760	IGHV3-64D	A0A0J9YX35	117 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	IFNL4	K9M1U5	179 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	KCNAB3	O43448	404 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	XRCC2	O43543	280 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	PLPP2	O43688	288 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	CIB2	O75838	187 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	PNP	P00491	289 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	LYN	P07948	512 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	SBK2	P0C263	348 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	HSD11B1	P28845	292 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZNF121	P58317	390 aa	Predicted RBP	11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	APOF	Q13790	326 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	SNAPC1	Q16533	368 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms