RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 OR2T2Q6IF00 324 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 NANOGP8Q6NSW7 305 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 SLC27A4Q6P1M0 643 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 FIP1L1Q6UN15 594 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 CALHM3Q86XJ0 350 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 NRMQ8IXM6 262 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 C19orf18Q8NEA5 215 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 OR13C2Q8NGS9 318 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 RAB40AQ8WXH6 277 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 ST8SIA4Q92187 359 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 CFHR4Q92496 578 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 HAVCR1Q96D42 359 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 NEIL1Q96FI4 390 aaPredicted RBP6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 PRRC1Q96M27 445 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 CCT8L2Q96SF2 557 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 TMEM246Q9BRR3 403 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 C1RLQ9NZP8 487 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 RHCGQ9UBD6 479 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 A4GNTQ9UNA3 340 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 ADAM18Q9Y3Q7 739 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 OR6C6A6NF89 314 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 F5H5P2 479 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 J3KTA2 159 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 IMPA2O14732 288 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 MLNRO43193 412 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 LY86O95711 162 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 CRYBA1P05813 215 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 RAC2P15153 192 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 CTLA4P16410 223 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 TUBG1P23258 451 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 PITPNBP48739 271 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 SLC9A3P48764 834 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 KRTAP10-3P60369 221 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 FGF12P61328 243 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 HOXA4Q00056 320 aaPredicted RBP6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 AQP6Q13520 282 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 KIR3DS1Q14943 382 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 CCDC92Q53HC0 331 aaPredicted RBP6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 CYBRD1Q53TN4 286 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 AGBL2Q5U5Z8 902 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 OLFML2AQ68BL7 652 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 LYPD2Q6UXB3 125 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 RHOUQ7L0Q8 258 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 OAFQ86UD1 273 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 FITM2Q8N6M3 262 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 BHLHE23Q8NDY6 225 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 OR8G5Q8NG78 346 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 OR8B3Q8NGG8 313 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 OR4F5Q8NH21 305 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 DYDC1Q8WWB3 177 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 PTP4A1Q93096 173 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 TPD52L3Q96J77 140 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 PLEKHA8Q96JA3 519 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 Q96M85 177 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 COG8Q96MW5 612 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 OR8B2Q96RD0 313 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 PKP2Q99959 881 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 CITED1Q99966 193 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 ECSITQ9BQ95 431 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 WACQ9BTA9 647 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 CHIAQ9BZP6 476 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 PRDM13Q9H4Q3 707 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 BEX1Q9HBH7 125 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 TUBG2Q9NRH3 451 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 TBC1D23Q9NUY8 699 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 CLN8Q9UBY8 286 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 MIOXQ9UGB7 285 aa6.48□□□□□ -1.37
SMCHD1-210ENST00000583800 TEX13CA0A0J9YWL9 993 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 KIR2DS1A0A191URI9 304 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 A0A1B0GUS0 222 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 CLPSL1A2RUU4 121 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 NOTOA8MTQ0 251 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 EFCAB9A8MZ26 197 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 IFNL4K9M1U5 179 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 M0QZ24 198 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 XKRYO14609 159 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 CDC42EP2O14613 210 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 RER1O15258 196 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 ACTL6BO94805 426 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 TK1P04183 234 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 HLA-DPB1P04440 258 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 SFTPBP07988 381 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 MELTFP08582 738 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 ZNF26P17031 533 aaPredicted RBP6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 KDELR2P33947 212 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 RPL4P36578 427 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 PMELP40967 661 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 GPR4P46093 362 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 SRP9P49458 86 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 PRKCDQ05655 676 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 KRR1Q13601 381 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 RAB32Q13637 225 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 CYLC2Q14093 348 aaPredicted RBP6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 TTMPQ5BVD1 217 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 BEND6Q5SZJ8 279 aaPredicted RBP6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 ZNF362Q5T0B9 420 aaPredicted RBP6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 GPR157Q5UAW9 335 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 PRAMEF6Q5VXH4 476 aa6.47□□□□□ -1.37
SMCHD1-210ENST00000583800 WDR25Q64LD2 544 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms