RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ZNF816Q0VGE8 651 aaPredicted RBP3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 AP1ARQ63HQ0 302 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 CLEC2AQ6UVW9 174 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 HORMAD1Q86X24 394 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 OSR2Q8N2R0 312 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 RMI2Q96E14 147 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 TBL1YQ9BQ87 522 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 C8orf17Q9NRJ1 99 aa3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 PDP1Q9P0J1 537 aaPredicted RBP3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 MYEF2Q9P2K5 600 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-219ENST00000583294 GPR179Q6PRD1 2367 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 SCN1AP35498 2009 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 A6NDN8 102 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 ZNF850A8MQ14 1090 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 CASQ2O14958 399 aaPredicted RBP3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 HLA-HP01893 362 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 UBCP0CG48 685 aaKnown RBP3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 PGA5P0DJD9 388 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 ZNF14P17017 642 aaPredicted RBP3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 LOXP28300 417 aaPredicted RBP3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 TNFSF9P41273 254 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 PRSS8Q16651 343 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 TTLQ8NG68 377 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 RPEQ96AT9 228 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 MTG1Q9BT17 334 aaPredicted RBP3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 TMEM243Q9BU79 118 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 C1orf198Q9H425 327 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 ENOPH1Q9UHY7 261 aa3.09□□□□□ -1.91
SMARCE1-219ENST00000583294 FHOD3Q2V2M9 1422 aa3.09□□□□□ -1.92
SMARCE1-219ENST00000583294 IGLV3-12A0A075B6K2 115 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 PDZK1P1A8MUH7 402 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 K7EM74 188 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 BCKDKO14874 412 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 KRT16P08779 473 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 PGA4P0DJD7 388 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 PGA3P0DJD8 388 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 ME2P23368 584 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 IRF8Q02556 426 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 RNASE13Q5GAN3 156 aaKnown RBP3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 STUMQ69YW2 141 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 KATNAL2Q8IYT4 538 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 MICU2Q8IYU8 434 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 ZNF645Q8N7E2 425 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 CA5BP1Q8WTZ4 195 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 SLC25A46Q96AG3 418 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 HAUS1Q96CS2 278 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 CDX2Q99626 313 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 RSG1Q9BU20 258 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 SAMD10Q9BYL1 202 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 LYRM4Q9HD34 91 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 MRPS30Q9NP92 439 aaKnown RBP3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 MRPL22Q9NWU5 206 aaKnown RBP3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 AHSPQ9NZD4 102 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 UBIAD1Q9Y5Z9 338 aa3.08□□□□□ -1.92
SMARCE1-219ENST00000583294 SUPT3HB4E1H0 165 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 GOLGA8TH3BQL2 631 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 CTAG2O75638 210 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 OXTP01178 125 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 IGLV3-25P01717 112 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 IL1RNP18510 177 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 ZNF547Q8IVP9 402 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 VKORC1L1Q8N0U8 176 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 BBOF1Q8ND07 529 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 OR52K2Q8NGK3 314 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 OR9A2Q8NGT5 310 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 OR13G1Q8NGZ3 307 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 OR51F2Q8NH61 342 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 ZNF721Q8TF20 911 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 RAB1CQ92928 201 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 PXMP2Q9NR77 195 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 RGS18Q9NS28 235 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 SAR1BQ9Y6B6 198 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 MROH7Q68CQ1 1323 aa3.07□□□□□ -1.92
SMARCE1-219ENST00000583294 TRAV25A0A0B4J276 109 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 LRRIQ4A6NIV6 560 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 OR5H1A6NKK0 313 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 GLSO94925 669 aaPredicted RBP3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 CD74P04233 296 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 GABRG2P18507 467 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 POLR2IP36954 125 aaKnown RBP3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 FABP6P51161 128 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 GABRA6Q16445 453 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 PHLPP2Q6ZVD8 1323 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 COMMD1Q8N668 190 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 OR5AR1Q8NGP9 310 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 OR1J4Q8NGS1 313 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 OR10G6Q8NH81 332 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 SGTBQ96EQ0 304 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 BTN2A3PQ96KV6 586 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 JSRP1Q96MG2 331 aaPredicted RBP3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 CALN1Q9BXU9 219 aa3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 EXOSC4Q9NPD3 245 aaKnown RBP3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 RRAGDQ9NQL2 400 aaPredicted RBP3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 YARS2Q9Y2Z4 477 aaKnown RBP3.06□□□□□ -1.92
SMARCE1-219ENST00000583294 EIF1BO60739 113 aaKnown RBP3.05□□□□□ -1.92
SMARCE1-219ENST00000583294 SERPINB7O75635 380 aa3.05□□□□□ -1.92
SMARCE1-219ENST00000583294 CD5P06127 495 aa3.05□□□□□ -1.92
SMARCE1-219ENST00000583294 DCNP07585 359 aaKnown RBP3.05□□□□□ -1.92
SMARCE1-219ENST00000583294 CD70P32970 193 aa3.05□□□□□ -1.92
SMARCE1-219ENST00000583294 PFN2P35080 140 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms