RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 MALLQ13021 153 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 KLRD1Q13241 179 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 KCNMB1Q16558 191 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 RSPO1Q2MKA7 263 aaPredicted RBP10.42□□□□□ -0.74
SS18-219ENST00000581570 HIST2H3PS2Q5TEC6 136 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 HIST2H3AQ71DI3 136 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 PGAP1Q75T13 922 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.42□□□□□ -0.74
SS18-219ENST00000581570 NRMQ8IXM6 262 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 PNKDQ8N490 385 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 DPP10Q8N608 796 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 GCSAMQ8N6F7 178 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 OR13C2Q8NGS9 318 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 CLPTM1LQ96KA5 538 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 DMRTB1Q96MA1 342 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 WWC2-AS2Q96NR7 200 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 ADAT1Q9BUB4 502 aaKnown RBP10.42□□□□□ -0.74
SS18-219ENST00000581570 SYT4Q9H2B2 425 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 NKIRAS1Q9NYS0 192 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 AURKCQ9UQB9 309 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 MAB21L2Q9Y586 359 aa10.42□□□□□ -0.74
SS18-219ENST00000581570 hCG_1807616A0A1W2PRN6 198 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 A6NLC8 198 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 F5H5K5 113 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 K7EIL1 84 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 FBXO24O75426 580 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 LCATP04180 440 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 GRPP07492 148 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 ACSM4P0C7M7 580 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 CENPAP49450 140 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 GZMMP51124 257 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 PRKCDQ05655 676 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 NFYCQ13952 458 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 LY6EQ16553 131 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 DEFB121Q5J5C9 76 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 TEX36Q5VZQ5 186 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 CORO6Q6QEF8 472 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 CCBE1Q6UXH8 406 aaPredicted RBP10.41□□□□□ -0.74
SS18-219ENST00000581570 ZNF826PQ6ZT77 177 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 MRPL21Q7Z2W9 205 aaKnown RBP10.41□□□□□ -0.74
SS18-219ENST00000581570 FAM122BQ7Z309 247 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 NAA40Q86UY6 237 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 Q8N7P7 452 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 BEND2Q8NDZ0 799 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 OR4F17Q8NGA8 305 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 OR4F4Q96R69 305 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 CCL13Q99616 98 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 SSX3Q99909 188 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 FAM234AQ9H0X4 552 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 RANBP3Q9H6Z4 567 aaPredicted RBP10.41□□□□□ -0.74
SS18-219ENST00000581570 A4GNTQ9UNA3 340 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 LHFPL6Q9Y693 200 aa10.41□□□□□ -0.74
SS18-219ENST00000581570 A0A1B0GW55 424 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 CD300LBA8K4G0 201 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 IMPA2O14732 288 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 ANGPT2O15123 496 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 LHBP01229 141 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 DUX4L2P0CJ85 424 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 DUX4L3P0CJ86 424 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 DUX4L4P0CJ87 422 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 DUX4L5P0CJ88 424 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 DUX4L6P0CJ89 424 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 DUX4L7P0CJ90 424 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 CD28P10747 220 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 UBE2E1P51965 193 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 SLC18A1P54219 525 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 ACSM1Q08AH1 577 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 KRR1Q13601 381 aaKnown RBP10.4□□□□□ -0.74
SS18-219ENST00000581570 MEP1BQ16820 701 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 KRTAP27-1Q3LI81 207 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 ZBED5Q49AG3 693 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 ZBTB37Q5TC79 503 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 WDR93Q6P2C0 686 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 DUX4L9Q6RFH8 374 aaPredicted RBP10.4□□□□□ -0.74
SS18-219ENST00000581570 CROCCP2Q86T23 111 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 DTX3Q8N9I9 347 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 FAM156AQ8NDB6 213 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 TNFRSF14Q92956 283 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 PRRC1Q96M27 445 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 NUAK2Q9H093 628 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 RABEP2Q9H5N1 569 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 NMNAT1Q9HAN9 279 aaPredicted RBP10.4□□□□□ -0.74
SS18-219ENST00000581570 RAB18Q9NP72 206 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 DUX4Q9UBX2 424 aa10.4□□□□□ -0.74
SS18-219ENST00000581570 LOC100653049A0A140TA62 436 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 CDC42EP2O14613 210 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 KRT34O76011 436 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 IFNA14P01570 189 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 IGLL1P15814 213 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 ZNF26P17031 533 aaPredicted RBP10.39□□□□□ -0.75
SS18-219ENST00000581570 CD33P20138 364 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 GGT2P36268 569 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 YAP1P46937 504 aaKnown RBP10.39□□□□□ -0.75
SS18-219ENST00000581570 ELF3P78545 371 aaPredicted RBP10.39□□□□□ -0.75
SS18-219ENST00000581570 MICBQ29980 383 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 PGM2L1Q6PCE3 622 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 SLC36A1Q7Z2H8 476 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 OR51G2Q8NGK0 314 aa10.39□□□□□ -0.75
SS18-219ENST00000581570 SLC7A13Q8TCU3 470 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms