RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 CACNG2Q9Y698 323 aa9.08□□□□□ -0.96
TOP3A-210ENST00000580713 IGHV3OR16-10A0A075B7F0 116 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 MAGEA13PA6NCF6 341 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 FAM181BA6NEQ2 426 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 A6NIZ1 184 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 FAM183AA6NL82 134 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 SNTNA6NMZ2 147 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 PIN1P1O15428 100 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 PRODHO43272 600 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 TRAF3IP2O43734 574 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-210ENST00000580713 RENP00797 406 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 LYNP07948 512 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 CCDC159P0C7I6 412 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 KLF3P57682 345 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-210ENST00000580713 RAP1BP61224 184 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 RAB1AP62820 205 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 RAP1AP62834 184 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 CSNK2BP67870 215 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF154Q13106 437 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 CRMP1Q14194 572 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 MELKQ14680 651 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 RAB39AQ14964 217 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 MESTQ5EB52 335 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 NXNL2Q5VZ03 156 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 CARD17Q5XLA6 110 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 FAM205BPQ63HN1 556 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 PLBD1Q6P4A8 553 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF813Q6ZN06 617 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 RHOUQ7L0Q8 258 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 HDDC2Q7Z4H3 204 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 BCDIN3DQ7Z5W3 292 aaKnown RBP9.07□□□□□ -0.96
TOP3A-210ENST00000580713 ADCK1Q86TW2 530 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 GID4Q8IVV7 300 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 CYB561A3Q8NBI2 242 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 NPEPL1Q8NDH3 523 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 SYNPRQ8TBG9 265 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 ASB10Q8WXI3 467 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF582Q96NG8 517 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-210ENST00000580713 CITED4Q96RK1 184 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 OR51B6Q9H340 312 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 MED20Q9H944 212 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 SAP30LQ9HAJ7 183 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 BRD7Q9NPI1 651 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 PLCXD1Q9NUJ7 323 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 NKIRAS2Q9NYR9 191 aa9.07□□□□□ -0.96
TOP3A-210ENST00000580713 PPIAL4EA0A075B759 164 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 PPIAL4CA0A0B4J2A2 164 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 SLC22A23A1A5C7 686 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 OR6C68A6NDL8 312 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF726A6NNF4 738 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 PPIAL4DF5H284 164 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 H7C1C5 153 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 AKAP8O43823 692 aaKnown RBP9.06□□□□□ -0.96
TOP3A-210ENST00000580713 XPNPEP2O43895 674 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 MT-ND5P03915 603 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 LCKP06239 509 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 PPIAL4FP0DN26 164 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 CRHBPP24387 322 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 CDKN2AP42771 156 aaKnown RBP9.06□□□□□ -0.96
TOP3A-210ENST00000580713 BIDP55957 195 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 GABARAPL2P60520 117 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 LCN6P62502 163 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 TAF9Q16594 264 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 KCTD21Q4G0X4 260 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 ARMC4Q5T2S8 1044 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 AADACL4Q5VUY2 407 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 ASPHD2Q6ICH7 369 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 NHLRC1Q6VVB1 395 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 BBS1Q8NFJ9 593 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 RFKQ969G6 155 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 ELMOD3Q96FG2 381 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 TXNDC15Q96J42 360 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 NMNAT3Q96T66 252 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 AMBNQ9NP70 447 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 SLCO1C1Q9NYB5 712 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.06□□□□□ -0.96
TOP3A-210ENST00000580713 TPRKBQ9Y3C4 175 aa9.06□□□□□ -0.96
TOP3A-210ENST00000580713 RPL36Q9Y3U8 105 aaKnown RBP9.06□□□□□ -0.96
TOP3A-210ENST00000580713 SOX21Q9Y651 276 aaPredicted RBP9.06□□□□□ -0.96
TOP3A-210ENST00000580713 CLPSL1A2RUU4 121 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 PRSS37A4D1T9 235 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 SLC22A31A6NKX4 558 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 HOXA3O43365 443 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-210ENST00000580713 TRMUO75648 421 aaKnown RBP9.05□□□□□ -0.96
TOP3A-210ENST00000580713 TSPAN15O95858 294 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 PRB2P02812 416 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-210ENST00000580713 SBK2P0C263 348 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 B4GALT1P15291 398 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 EEF1B2P24534 225 aaKnown RBP9.05□□□□□ -0.96
TOP3A-210ENST00000580713 SLC25A1P53007 311 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 RPS7P62081 194 aaKnown RBP9.05□□□□□ -0.96
TOP3A-210ENST00000580713 GLO1Q04760 184 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF91Q05481 1191 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 SLC3A1Q07837 685 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 CAMK2DQ13557 499 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 APOFQ13790 326 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 MOGQ16653 247 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 KLHL12Q53G59 568 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 PHYHD1Q5SRE7 291 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 MEPCEQ7L2J0 689 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms