RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 IFNGR2P38484 337 aa14.87□□□□□ -0.03
MKS1-209ENST00000580127 OMPP47874 163 aa14.87□□□□□ -0.03
MKS1-209ENST00000580127 TRAP1Q12931 704 aaKnown RBP14.87□□□□□ -0.03
MKS1-209ENST00000580127 MEP1BQ16820 701 aa14.87□□□□□ -0.03
MKS1-209ENST00000580127 RSPO1Q2MKA7 263 aaPredicted RBP14.87□□□□□ -0.03
MKS1-209ENST00000580127 RFX4Q33E94 735 aa14.87□□□□□ -0.03
MKS1-209ENST00000580127 SCCPDHQ8NBX0 429 aa14.87□□□□□ -0.03
MKS1-209ENST00000580127 SLC26A10Q8NG04 563 aa14.87□□□□□ -0.03
MKS1-209ENST00000580127 TSSK2Q96PF2 358 aa14.87□□□□□ -0.03
MKS1-209ENST00000580127 NSRP1Q9H0G5 558 aaKnown RBP14.87□□□□□ -0.03
MKS1-209ENST00000580127 FGFR1OP2Q9NVK5 253 aa14.87□□□□□ -0.03
MKS1-209ENST00000580127 C14orf119Q9NWQ9 140 aa14.87□□□□□ -0.03
MKS1-209ENST00000580127 PDP1Q9P0J1 537 aaPredicted RBP14.87□□□□□ -0.03
MKS1-209ENST00000580127 CAB39Q9Y376 341 aaPredicted RBP14.87□□□□□ -0.03
MKS1-209ENST00000580127 RNF114Q9Y508 228 aa14.87□□□□□ -0.03
MKS1-209ENST00000580127 IGLV1-36A0A0B4J1U3 117 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 CENPVL3A0A0U1RRI6 287 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 ARPC3O15145 178 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 CCDC22O60826 627 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 PPP1R3DO95685 299 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 SLC7A2P52569 658 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 CLEC12AQ5QGZ9 265 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 SFRP4Q6FHJ7 346 aaPredicted RBP14.86□□□□□ -0.03
MKS1-209ENST00000580127 GDPGP1Q6ZNW5 385 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 OR6V1Q8N148 313 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 OR4C15Q8NGM1 316 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 LRTOMTQ8WZ04 291 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 NMNAT3Q96T66 252 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 IFT27Q9BW83 186 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 NDUFAF4Q9P032 175 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 CYB5R1Q9UHQ9 305 aa14.86□□□□□ -0.03
MKS1-209ENST00000580127 SAMD4AQ9UPU9 718 aaKnown RBP14.86□□□□□ -0.03
MKS1-209ENST00000580127 WNK1Q9H4A3 2382 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 IGHV1-69DA0A0B4J2H0 117 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 BTBD17A6NE02 478 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 CD300LBA8K4G0 201 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 C22orf46C9J442 243 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 IGHV1-69P01742 117 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 COX4I1P13073 169 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 GRK5P34947 590 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 GSK3BP49841 420 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 SF3A3Q12874 501 aaKnown RBP eCLIP14.85□□□□□ -0.031e-7■■■■□ 19.8
MKS1-209ENST00000580127 MPPED2Q15777 294 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 TAF9Q16594 264 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 KRTAP27-1Q3LI81 207 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 SLC18B1Q6NT16 456 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 LINC00346Q8IVM7 164 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 C19orf18Q8NEA5 215 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 OR4K13Q8NH42 304 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 OR52J3Q8NH60 311 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 RPRD1BQ9NQG5 326 aaKnown RBP14.85□□□□□ -0.03
MKS1-209ENST00000580127 MRPL15Q9P015 296 aaKnown RBP14.85□□□□□ -0.03
MKS1-209ENST00000580127 ARMCX1Q9P291 453 aa14.85□□□□□ -0.03
MKS1-209ENST00000580127 VWFP04275 2813 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 OOEPA6NGQ2 149 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 C3orf80F5H4A9 247 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 M0R135 149 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 DCTN6O00399 190 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 NME4O00746 187 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 SFTPBP07988 381 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 SRSF4Q08170 494 aaKnown RBP14.84□□□□□ -0.03
MKS1-209ENST00000580127 PRAMEF6Q5VXH4 476 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 RUSC1-AS1Q66K80 236 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 CFAP77Q6ZQR2 320 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 NAA40Q86UY6 237 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 ZBTB46Q86UZ6 589 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 FANK1Q8TC84 345 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 NPRL2Q8WTW4 380 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 LHX4Q969G2 390 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 ZNF799Q96GE5 643 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 ADAT1Q9BUB4 502 aaKnown RBP14.84□□□□□ -0.03
MKS1-209ENST00000580127 CNTD2Q9H8S5 307 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 TCF7L1Q9HCS4 588 aa14.84□□□□□ -0.03
MKS1-209ENST00000580127 NOTCH1P46531 2555 aa14.83□□□□□ -0.03
MKS1-209ENST00000580127 TRBV4-1A0A0J9YWV2 114 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 A6NLC8 198 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 GRPP07492 148 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 HIST1H1CP16403 213 aaKnown RBP14.83□□□□□ -0.04
MKS1-209ENST00000580127 DDOSTP39656 456 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 ARF6P62330 175 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 TAF13Q15543 124 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 GLYATQ6IB77 296 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 DRAM2Q6UX65 266 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 HACD2Q6Y1H2 254 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 CMTM4Q8IZR5 234 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 MCUR1Q96AQ8 359 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 DMRTB1Q96MA1 342 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 TBX15Q96SF7 602 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 RBM4BQ9BQ04 359 aaKnown RBP14.83□□□□□ -0.04
MKS1-209ENST00000580127 OR52D1Q9H346 318 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 OPA3Q9H6K4 179 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 DCAF13Q9NV06 445 aaKnown RBP14.83□□□□□ -0.04
MKS1-209ENST00000580127 C1orf123Q9NWV4 160 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 TRRAPQ9Y4A5 3859 aa14.83□□□□□ -0.04
MKS1-209ENST00000580127 hCG_1807616A0A1W2PRN6 198 aa14.82□□□□□ -0.04
MKS1-209ENST00000580127 GPR137BO60478 399 aa14.82□□□□□ -0.04
MKS1-209ENST00000580127 GADD45GO95257 159 aa14.82□□□□□ -0.04
MKS1-209ENST00000580127 PTBP3O95758 552 aaKnown RBP14.82□□□□□ -0.04
MKS1-209ENST00000580127 MMP9P14780 707 aa14.82□□□□□ -0.04
MKS1-209ENST00000580127 NCK1P16333 377 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms