RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 RGS9O75916 674 aaPredicted RBP13.95□□□□□ -0.18
SS18-211ENST00000578954 SERPINA3P01011 423 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 LCATP04180 440 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 FGF9P31371 208 aaPredicted RBP13.95□□□□□ -0.18
SS18-211ENST00000578954 PEX19P40855 299 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 ZNF83P51522 516 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 FABP5Q01469 135 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 CTF1Q16619 201 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 UNQ9370/PRO34162Q6UXP9 181 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 TMEM91Q6ZNR0 172 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 CLVS1Q8IUQ0 354 aaPredicted RBP13.95□□□□□ -0.18
SS18-211ENST00000578954 CCDC54Q8NEL0 328 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 ABHD4Q8TB40 342 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 ITFG2Q969R8 447 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 TRMT61AQ96FX7 289 aaKnown RBP13.95□□□□□ -0.18
SS18-211ENST00000578954 TMED9Q9BVK6 235 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 NAA50Q9GZZ1 169 aaKnown RBP13.95□□□□□ -0.18
SS18-211ENST00000578954 OR51E2Q9H255 320 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 HHLA2Q9UM44 414 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 ANKHD1Q8IWZ3 2542 aaKnown RBP13.95□□□□□ -0.18
SS18-211ENST00000578954 DOPEY1Q5JWR5 2465 aa13.95□□□□□ -0.18
SS18-211ENST00000578954 LOC390937A0A1W2PQ73 354 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 M0R1B8 84 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 P2RY10O00398 339 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 GABRPO00591 440 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 AIREO43918 545 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 SMPD2O60906 423 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 GATBO75879 557 aaKnown RBP13.94□□□□□ -0.18
SS18-211ENST00000578954 CCNOP22674 350 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 PTAFRP25105 342 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 CALCRP30988 508 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 Q499Y3 187 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 FOXB2Q5VYV0 432 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 RFPL4BQ6ZWI9 263 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 C1orf174Q8IYL3 243 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 ZNF101Q8IZC7 436 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 RDH10Q8IZV5 341 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 OR13C5Q8NGS8 318 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 OR10AC1Q8NH08 325 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 OR51E1Q8TCB6 317 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 GPR148Q8TDV2 347 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 RAB2BQ8WUD1 216 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 PHYHIPQ92561 330 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 THRSPQ92748 146 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 TMEM203Q969S6 136 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 SGK3Q96BR1 496 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 LYZL4Q96KX0 146 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 MED18Q9BUE0 208 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 FAM192AQ9GZU8 254 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 NGBQ9NPG2 151 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 NDRG3Q9UGV2 375 aa13.94□□□□□ -0.18
SS18-211ENST00000578954 TBX1O43435 398 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 NGFP01138 241 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 IGFBP2P18065 325 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 TUBG1P23258 451 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 CD40P25942 277 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 ACSM3Q53FZ2 586 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 GLYATL3Q5SZD4 288 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 DOK3Q7L591 496 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 WFDC8Q8IUA0 241 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 OR51A4Q8NGJ6 313 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 RPL3LQ92901 407 aaKnown RBP13.93□□□□□ -0.18
SS18-211ENST00000578954 ISOC1Q96CN7 298 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 DACH2Q96NX9 599 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 KCNS3Q9BQ31 491 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 OPA3Q9H6K4 179 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 GPR84Q9NQS5 396 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 TUBG2Q9NRH3 451 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 EIF3KQ9UBQ5 218 aaKnown RBP13.93□□□□□ -0.18
SS18-211ENST00000578954 SSR3Q9UNL2 185 aa13.93□□□□□ -0.18
SS18-211ENST00000578954 TRBV5-7A0A0A0MS05 114 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 hCG_38984A0A1B0GV85 526 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 A0A1B0GVI7 797 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 CLEC18AA5D8T8 446 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 DHRS7CA6NNS2 312 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 ZNF879B4DU55 563 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 SYT7O43581 403 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 UCHL1P09936 223 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 ZNF12P17014 697 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 CFL1P23528 166 aaKnown RBP13.92□□□□□ -0.18
SS18-211ENST00000578954 UCP2P55851 309 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 SRSF1Q07955 248 aaKnown RBP eCLIP13.92□□□□□ -0.18
SS18-211ENST00000578954 INSL4Q14641 139 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 ODF4Q2M2E3 257 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 ZMAT1Q5H9K5 638 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 TMEM108Q6UXF1 575 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 CLEC18BQ6UXF7 455 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 PAMR1Q6UXH9 720 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 UNQ6126/PRO20091Q6UXV3 157 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 ACBD4Q8NC06 268 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 CLEC18CQ8NCF0 446 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 OR5L1Q8NGL2 311 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 AKAP1Q92667 903 aaKnown RBP eCLIP13.92□□□□□ -0.18
SS18-211ENST00000578954 REEP6Q96HR9 211 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 DERL3Q96Q80 235 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 CHCHD6Q9BRQ6 235 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 SOX7Q9BT81 388 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 BCL2L14Q9BZR8 327 aa13.92□□□□□ -0.18
SS18-211ENST00000578954 TXNL4BQ9NX01 149 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms