RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 AKR7A3O95154 331 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 SFT2D2O95562 160 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 AAED1Q7RTV5 226 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 TMEM217Q8N7C4 229 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 CPT1CQ8TCG5 803 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 SDHCQ99643 169 aaPredicted RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 PARP12Q9H0J9 701 aaKnown RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 ASH2LQ9UBL3 628 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 MCTS1Q9ULC4 181 aaKnown RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 URGCP-MRPS24S4R325 110 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 THSD7AQ9UPZ6 1657 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 A0A1B0GX78 115 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 CEBPZOSA8MTT3 80 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 FABP1P07148 127 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 SMIM6P0DI80 62 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 CD96P40200 585 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 KCNJ3P48549 501 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 GSK3AP49840 483 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 GUK1Q16774 197 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 TUSC1Q2TAM9 212 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 PDLIM3Q53GG5 364 aaPredicted RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 ZNF425Q6IV72 752 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 TFAP2EQ6VUC0 442 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 OR4S1Q8NGB4 309 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 SEC11CQ9BY50 192 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 NRSN2Q9GZP1 204 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 DHCR7Q9UBM7 475 aaKnown RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 ING1Q9UK53 422 aaPredicted RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 SF3B6Q9Y3B4 125 aaKnown RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 PCDHGA5Q9Y5G8 931 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 KNL1Q8NG31 2342 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 CCDC163A0A0D9SF12 145 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 H7BYZ3 331 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 ICOSLGO75144 302 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 IKZF1Q13422 519 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 ADIRFQ15847 76 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 PRICKLE4Q2TBC4 344 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 POC1BQ8TC44 478 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 HSD17B8Q92506 261 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 TSLPQ969D9 159 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 AKR1E2Q96JD6 320 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 KCNIP2Q9NS61 270 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 FGF21Q9NSA1 209 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 PI3P19957 117 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 TBXA2RP21731 343 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 TMEM65Q6PI78 240 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 RTN4IP1Q8WWV3 396 aaPredicted RBP9.35□□□□□ -0.91
PTPRM-205ENST00000577827 PP6455Q8WZ26 134 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 CHST6Q9GZX3 395 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 OPA3Q9H6K4 179 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 UQCC1Q9NVA1 299 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 MED9Q9NWA0 146 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 NMBP08949 121 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 CD79AP11912 226 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 RPS15P62841 145 aaKnown RBP9.35□□□□□ -0.91
PTPRM-205ENST00000577827 ZNF273Q14593 569 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 LILRA6Q6PI73 481 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 CORO6Q6QEF8 472 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 UBE3DQ7Z6J8 389 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 MAML2Q8IZL2 1156 aaPredicted RBP9.35□□□□□ -0.91
PTPRM-205ENST00000577827 NTNG2Q96CW9 530 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 UHRF2Q96PU4 802 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 OR2A5Q96R48 311 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 DUSP23Q9BVJ7 150 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 PLEKHF2Q9H8W4 249 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 TUBG2Q9NRH3 451 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 CTSFQ9UBX1 484 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 MBD1Q9UIS9 605 aaPredicted RBP9.35□□□□□ -0.91
PTPRM-205ENST00000577827 GDF2Q9UK05 429 aaPredicted RBP9.35□□□□□ -0.91
PTPRM-205ENST00000577827 TCRBV16S1A1N1A0A5B0 115 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 ZFP92A6NM28 416 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 POU3F2P20265 443 aaPredicted RBP9.35□□□□□ -0.91
PTPRM-205ENST00000577827 IL2RGP31785 369 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 CDKN2AP42771 156 aaKnown RBP9.35□□□□□ -0.91
PTPRM-205ENST00000577827 BATFQ16520 125 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTPRM-205ENST00000577827 SHEQ5VZ18 495 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 BRICD5Q6PL45 260 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 PPP1R3BQ86XI6 285 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 PRR18Q8N4B5 295 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 ZNF251Q9BRH9 671 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 NMES1Q9C002 83 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 RASL12Q9NYN1 266 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 ZMAT5Q9UDW3 170 aaKnown RBP9.35□□□□□ -0.91
PTPRM-205ENST00000577827 MRM2Q9UI43 246 aaKnown RBP9.35□□□□□ -0.91
PTPRM-205ENST00000577827 GAB2Q9UQC2 676 aa9.35□□□□□ -0.91
PTPRM-205ENST00000577827 MDFIC2A0A1B0GVS7 189 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 MBTPS2O43462 519 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 SUMF1Q8NBK3 374 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 LIPHQ8WWY8 451 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 TVP23CQ96ET8 276 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 EMC6Q9BV81 110 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 TGIF2Q9GZN2 237 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 ST6GALNAC2Q9UJ37 374 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 A0A0U1RQK1 487 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 HSBP1L1C9JCN9 74 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 TNFSF12O43508 249 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 JMJD7P0C870 316 aa9.34□□□□□ -0.91
PTPRM-205ENST00000577827 RFC3P40938 356 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms