RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 PPP1R3DO95685 299 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 IGHV1-69P01742 117 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 ZNF26P17031 533 aaPredicted RBP11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 RBMXP38159 391 aaKnown RBP11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 PMELP40967 661 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 CDKN2AP42771 156 aaKnown RBP11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 OMPP47874 163 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 SLC7A2P52569 658 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 MAB21L1Q13394 359 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 MEP1BQ16820 701 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 CLEC12AQ5QGZ9 265 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 PRAMEF6Q5VXH4 476 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 OTPQ5XKR4 325 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 RUSC1-AS1Q66K80 236 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 SLC18B1Q6NT16 456 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 CORO6Q6QEF8 472 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 ZNF841Q6ZN19 808 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 PTCHD4Q6ZW05 846 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 SLC15A3Q8IY34 581 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 CMTM4Q8IZR5 234 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 SLC26A10Q8NG04 563 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 ZNF799Q96GE5 643 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 IFT27Q9BW83 186 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 EFCAB1Q9HAE3 211 aa11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 SRA1Q9HD15 236 aaKnown RBP11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 MRPL15Q9P015 296 aaKnown RBP11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 PDP1Q9P0J1 537 aaPredicted RBP11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 SOX21Q9Y651 276 aaPredicted RBP11.8□□□□□ -0.52
SMARCD2-205ENST00000577686 PKD1L1Q8TDX9 2849 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 IGLV1-36A0A0B4J1U3 117 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 hCG_1807616A0A1W2PRN6 198 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 SLC22A31A6NKX4 558 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 CD300LBA8K4G0 201 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 ARPC3O15145 178 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 GPR137BO60478 399 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 CCDC22O60826 627 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 CA6P23280 308 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 GSK3BP49841 420 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 TAF9Q16594 264 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 C2orf68Q2NKX9 166 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 RFX4Q33E94 735 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 TSEN54Q7Z6J9 526 aaKnown RBP11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 LDLRAD3Q86YD5 345 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 LINC00346Q8IVM7 164 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 NPRL2Q8WTW4 380 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 LHX4Q969G2 390 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 TSSK2Q96PF2 358 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 NSRP1Q9H0G5 558 aaKnown RBP11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 TCF7L1Q9HCS4 588 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 RPRD1BQ9NQG5 326 aaKnown RBP11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 FGFR1OP2Q9NVK5 253 aa11.79□□□□□ -0.52
SMARCD2-205ENST00000577686 CENPVL3A0A0U1RRI6 287 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 A0A1B0GVI7 797 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 SFTPBP07988 381 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 FBP1P09467 338 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 FUT4P22083 530 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 EEF1B2P24534 225 aaKnown RBP11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 GUCA2AQ02747 115 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 TAF13Q15543 124 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 SNCBQ16143 134 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 KRTAP27-1Q3LI81 207 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 SFRP4Q6FHJ7 346 aaPredicted RBP11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 DHRS7BQ6IAN0 325 aaPredicted RBP11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 DRAM2Q6UX65 266 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 CFAP77Q6ZQR2 320 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 OR6V1Q8N148 313 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 OR52L1Q8NGH7 329 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 OR4K13Q8NH42 304 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 TAF15Q92804 592 aaKnown RBP eCLIP11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 MCUR1Q96AQ8 359 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 DMRTB1Q96MA1 342 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 TBX15Q96SF7 602 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 NMNAT3Q96T66 252 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 PKP2Q99959 881 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 RBM4BQ9BQ04 359 aaKnown RBP11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 OR52D1Q9H346 318 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 SP140LQ9H930 580 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 C1orf123Q9NWV4 160 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 NDUFAF4Q9P032 175 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 CYB5R1Q9UHQ9 305 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 KPTNQ9Y664 436 aa11.78□□□□□ -0.52
SMARCD2-205ENST00000577686 ANKRD30BLA7E2S9 258 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 NME4O00746 187 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 BHLHE40O14503 412 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 GPR37O15354 613 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 XRCC2O43543 280 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 CLPXO76031 633 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 GADD45GO95257 159 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 PTBP3O95758 552 aaKnown RBP11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 COX4I1P13073 169 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 MMP9P14780 707 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 DDOSTP39656 456 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 RELBQ01201 579 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 MPPED2Q15777 294 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 RPL13AP3Q6NVV1 102 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 HACD2Q6Y1H2 254 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 BTN2A1Q7KYR7 527 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 SLC36A1Q7Z2H8 476 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 ZBTB46Q86UZ6 589 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms