RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 BPIFB2Q8N4F0 458 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 FITM2Q8N6M3 262 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 C3orf56Q8N813 242 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 OR2Z1Q8NG97 314 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 FAM216AQ8WUB2 273 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 ITLN1Q8WWA0 313 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 RASD2Q96D21 266 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 CMBLQ96DG6 245 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 TIMD4Q96H15 378 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 SIKE1Q9BRV8 207 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 FNDC11Q9BVV2 318 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 POLR2J2Q9GZM3 115 aaKnown RBP5.23□□□□□ -1.57
NUP88-212ENST00000576708 EGLN1Q9GZT9 426 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 POLR2J3Q9H1A7 115 aaKnown RBP5.23□□□□□ -1.57
NUP88-212ENST00000576708 RERGLQ9H628 205 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 VIPAS39Q9H9C1 493 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 TMEM106BQ9NUM4 274 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 GID8Q9NWU2 228 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 STX18Q9P2W9 335 aaKnown RBP5.23□□□□□ -1.57
NUP88-212ENST00000576708 IL20RAQ9UHF4 553 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 LAMP5Q9UJQ1 280 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 PURGQ9UJV8 347 aaKnown RBP5.23□□□□□ -1.57
NUP88-212ENST00000576708 NPTNQ9Y639 398 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 ARHGAP32A7KAX9 2087 aa5.23□□□□□ -1.57
NUP88-212ENST00000576708 TENM1Q9UKZ4 2725 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 IGHV3OR16-10A0A075B7F0 116 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 TEX13CA0A0J9YWL9 993 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 A6NIZ1 184 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 H0YL77 283 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 J3QLI3 93 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 CXCR6O00574 342 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 NME4O00746 187 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 CASQ2O14958 399 aaPredicted RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 SGCEO43556 437 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 SPRY1O43609 319 aaPredicted RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 SLC16A7O60669 478 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 DIRAS1O95057 198 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 SERPINA1P01009 418 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 NPPAP01160 153 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 IFNW1P05000 195 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 CD55P08174 381 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 ADH4P08319 380 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 CD14P08571 375 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 VIMP08670 466 aaKnown RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 TROVE2P10155 538 aaKnown RBP eCLIP5.22□□□□□ -1.57
NUP88-212ENST00000576708 COMPP49747 757 aaPredicted RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 ARHGDIAP52565 204 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 SLC7A2P52569 658 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 RAP1BP61224 184 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 PCBD1P61457 104 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 RAP1AP62834 184 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 UBA52P62987 128 aaKnown RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 HLXQ14774 488 aaPredicted RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 ZMYND11Q15326 602 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 MAPRE2Q15555 327 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 ZBED5Q49AG3 693 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 IFI44LQ53G44 452 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 KLF17Q5JT82 389 aaPredicted RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 MBOAT2Q6ZWT7 520 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 USP43Q70EL4 1123 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 FAM122BQ7Z309 247 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 OFCC1Q8IZS5 231 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 SIGLECL1Q8N7X8 197 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 PCYOX1LQ8NBM8 494 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 DEFB108BQ8NET1 73 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 ZNF420Q8TAQ5 688 aaPredicted RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 NANPQ8TBE9 248 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 ST7LQ8TDW4 575 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 ZFAND2BQ8WV99 257 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 ACOT11Q8WXI4 607 aaPredicted RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 LZICQ8WZA0 190 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 ZNF570Q96NI8 536 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 TSSK2Q96PF2 358 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 SIGLEC11Q96RL6 698 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 RBM4Q9BWF3 364 aaKnown RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 SUCNR1Q9BXA5 334 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 WDR76Q9H967 626 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 ELOVL3Q9HB03 270 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 CYSLTR2Q9NS75 346 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 AURKAIP1Q9NWT8 199 aaPredicted RBP5.22□□□□□ -1.57
NUP88-212ENST00000576708 PTTG3PQ9NZH4 202 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 GRHPRQ9UBQ7 328 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 ZDHHC8Q9ULC8 765 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 CAPN7Q9Y6W3 813 aa5.22□□□□□ -1.57
NUP88-212ENST00000576708 PRSS37A4D1T9 235 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 GMNCA6NCL1 334 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 DCTN6O00399 190 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 SOCS2O14508 198 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 RER1O15258 196 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 PTP4A3O75365 173 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 KHDRBS3O75525 346 aaKnown RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 FOXH1O75593 365 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 CYB5R3P00387 301 aaPredicted RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 NR2C1P13056 603 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 COX4I1P13073 169 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 SELEP16581 610 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 ZNF12P17014 697 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 GSTM3P21266 225 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 KITLGP21583 273 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 IFNA8P32881 189 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms