RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 HEATR1Q9H583 2144 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 DUSP21Q9H596 190 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 ISG20L2Q9H9L3 353 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 ACOXLQ9NUZ1 547 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 FAM206AQ9NX38 181 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 MYEF2Q9P2K5 600 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 ERVK-18Q9QC07 812 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 DUSP13Q9UII6 198 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 GNG8Q9UK08 70 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 ITGB1BP2Q9UKP3 347 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 LAMP3Q9UQV4 416 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 EXOSC1Q9Y3B2 195 aaKnown RBP7.35□□□□□ -1.23
NUP88-211ENST00000575976 R4GMQ9 66 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 RTTNQ86VV8 2226 aa7.35□□□□□ -1.23
NUP88-211ENST00000575976 IGLV3-9A0A075B6K5 115 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 B9A039 149 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 LOC110117498-PIK3R3F6TDL0 507 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 TACSTD2P09758 323 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 ZNF250P15622 560 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 MYL12AP19105 171 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 TUBG1P23258 451 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 GCH1P30793 250 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 MMP16P51512 607 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 PRSS12P56730 875 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 ACTA2P62736 377 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 ACTG2P63267 376 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 ZNF92Q03936 586 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 MALLQ13021 153 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 PSG7Q13046 419 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 GK2Q14410 553 aaPredicted RBP7.34□□□□□ -1.23
NUP88-211ENST00000575976 HLXQ14774 488 aaPredicted RBP7.34□□□□□ -1.23
NUP88-211ENST00000575976 EFNB3Q15768 340 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 SWI5Q1ZZU3 235 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 ZNF829Q3KNS6 432 aaPredicted RBP7.34□□□□□ -1.23
NUP88-211ENST00000575976 ALKBH6Q3KRA9 238 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 OR2G6Q5TZ20 316 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 AGAP6Q5VW22 663 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 MBNL2Q5VZF2 373 aaKnown RBP7.34□□□□□ -1.23
NUP88-211ENST00000575976 C11orf71Q6IPW1 123 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 FBXW12Q6X9E4 464 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 C20orf204Q6ZNR8 217 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 FAM220AQ7Z4H9 259 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 KCTD20Q7Z5Y7 419 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 DTX2Q86UW9 622 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 SYS1Q8N2H4 156 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 KLHL36Q8N4N3 616 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 OR8B12Q8NGG6 310 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 OR2AE1Q8NHA4 323 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 SPRYD4Q8WW59 207 aaPredicted RBP7.34□□□□□ -1.23
NUP88-211ENST00000575976 RORBQ92753 470 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 MYDGFQ969H8 173 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 SGK3Q96BR1 496 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 HAVCR1Q96D42 359 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 CMBLQ96DG6 245 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 MRPL48Q96GC5 212 aaKnown RBP7.34□□□□□ -1.23
NUP88-211ENST00000575976 LURAP1Q96LR2 239 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 TRAF4Q9BUZ4 470 aaPredicted RBP7.34□□□□□ -1.23
NUP88-211ENST00000575976 PBOV1Q9GZY1 135 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 OR10A2Q9H208 303 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 PLK3Q9H4B4 646 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 SP140LQ9H930 580 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 TUBG2Q9NRH3 451 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 CBLN4Q9NTU7 201 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 FAIMQ9NVQ4 179 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 CHCHD3Q9NX63 227 aaKnown RBP7.34□□□□□ -1.23
NUP88-211ENST00000575976 OR52A1Q9UKL2 312 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 GTF2A1LQ9UNN4 478 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 SLC22A13Q9Y226 551 aa7.34□□□□□ -1.23
NUP88-211ENST00000575976 CAB39Q9Y376 341 aaPredicted RBP7.34□□□□□ -1.23
NUP88-211ENST00000575976 CSMD2Q7Z408 3487 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 RAI1Q7Z5J4 1906 aaPredicted RBP7.33□□□□□ -1.24
NUP88-211ENST00000575976 A0A1W2PPW3 197 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 ACOD1A6NK06 481 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 E9PI62 339 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 H3BSA7 217 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 XRCC2O43543 280 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 IGHV3-13P01766 116 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 TTRP02766 147 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 MT-ND2P03891 347 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 RAC2P15153 192 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 CD53P19397 219 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 EVX1P49640 407 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 KLF3P57682 345 aaPredicted RBP7.33□□□□□ -1.24
NUP88-211ENST00000575976 SELENOVP59797 346 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 TIGD6Q17RP2 521 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 GFOD2Q3B7J2 385 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 WDR38Q5JTN6 314 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 OR2T2Q6IF00 324 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 PAMR1Q6UXH9 720 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 SPNS3Q6ZMD2 512 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 TMPRSS11AQ6ZMR5 421 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 PGAP1Q75T13 922 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 MRPL21Q7Z2W9 205 aaKnown RBP7.33□□□□□ -1.24
NUP88-211ENST00000575976 CATSPERDQ86XM0 798 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 OR5AS1Q8N127 324 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 PRSS35Q8N3Z0 413 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 NANOGP1Q8N7R0 232 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 ZNF485Q8NCK3 441 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 OR52H1Q8NGJ2 320 aa7.33□□□□□ -1.24
NUP88-211ENST00000575976 OR52N1Q8NH53 320 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms