RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 MMP15P51511 669 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 ZNF121P58317 390 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 PSMA6P60900 246 aaKnown RBP10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 RIPK1Q13546 671 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 SNCBQ16143 134 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 CARTPTQ16568 116 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 SNAI3Q3KNW1 292 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 ZNF691Q5VV52 312 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 OR2T2Q6IF00 324 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 FAM57BQ71RH2 274 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 ZCCHC24Q8N2G6 241 aaKnown RBP10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 OR8G5Q8NG78 346 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 OR13G1Q8NGZ3 307 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 UBASH3BQ8TF42 649 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 SPRYD4Q8WW59 207 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 SLC22A4Q9H015 551 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 BRD7Q9NPI1 651 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 COPS3Q9UNS2 423 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 KLHDC2Q9Y2U9 406 aa10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 NOP16Q9Y3C1 178 aaKnown RBP10.9□□□□□ -0.66
TRAPPC1-206ENST00000573989 OTOGQ6ZRI0 2925 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 TMEM269A0A1B0GVZ9 245 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 LOC390937A0A1W2PQ73 354 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 IQCF6A8MYZ5 107 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 SPRY3O43610 288 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 SULT1C4O75897 302 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 FADS2O95864 444 aaKnown RBP10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 ADH4P08319 380 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 SLC25A16P16260 332 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 DDOSTP39656 456 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 ADARB1P78563 741 aaKnown RBP10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 CCL8P80075 99 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 MRPS11P82912 194 aaKnown RBP10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 RAB40BQ12829 278 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 KLHL22Q53GT1 634 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 GLYATL3Q5SZD4 288 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 PLEKHG7Q6ZR37 379 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 FAM220AQ7Z4H9 259 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 KRTAP1-3Q8IUG1 177 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 C8orf59Q8N0T1 100 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 OR5AS1Q8N127 324 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 FTMTQ8N4E7 242 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 ZNF525Q8N782 197 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 RDH5Q92781 318 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 ITFG2Q969R8 447 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 REEP6Q96HR9 211 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 TBX5Q99593 518 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 PIMREGQ9BSJ6 248 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 REPIN1Q9BWE0 567 aaKnown RBP10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 MOB1AQ9H8S9 216 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 SAP30LQ9HAJ7 183 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 MSL2Q9HCI7 577 aa10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 MAP1AP78559 2803 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC1-206ENST00000573989 A0A1W2PQL4 384 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 DAPL1A0PJW8 107 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 IRGMA1A4Y4 181 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 PSMD9O00233 223 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 APOL3O95236 402 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 TACSTD2P09758 323 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 DBTP11182 482 aaKnown RBP10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 CD99P14209 185 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 TNFRSF1AP19438 455 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 HSPA13P48723 471 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 TNFAIP6P98066 277 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 ZNF92Q03936 586 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 ZNF91Q05481 1191 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 CDK5R2Q13319 367 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 TSTQ16762 297 aaKnown RBP10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 GFOD2Q3B7J2 385 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 KCTD20Q7Z5Y7 419 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 ZNF786Q8N393 782 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 ACBD7Q8N6N7 88 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 YIPF7Q8N8F6 280 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 BHLHE23Q8NDY6 225 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 OR2Z1Q8NG97 314 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 OR2AE1Q8NHA4 323 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 SPSB4Q96A44 273 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 ELMOD3Q96FG2 381 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 TTTY10Q9BZA0 68 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 DLL4Q9NR61 685 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 TMEM100Q9NV29 134 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 EXOGQ9Y2C4 368 aaKnown RBP10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 AKAP9Q99996 3911 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 MED13LQ71F56 2210 aa10.88□□□□□ -0.67
TRAPPC1-206ENST00000573989 A0A0U1RQV5 110 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 METTL15A6NJ78 407 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 ZSCAN5BA6NJL1 495 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 CD300LBA8K4G0 201 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 LOC110117498-PIK3R3F6TDL0 507 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 LY6HO94772 140 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 ATP6V1G2O95670 118 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 CLIC3O95833 236 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 IGHV1-46P01743 117 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 CD55P08174 381 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 FOSL1P15407 271 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 ACHEP22303 614 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 MAGEB1P43366 347 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 MMP16P51512 607 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 ACTA2P62736 377 aa10.87□□□□□ -0.67
TRAPPC1-206ENST00000573989 ACTG2P63267 376 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms