RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 DCTN2Q13561 401 aaKnown RBP8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 OR8G1Q15617 311 aa8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 AANATQ16613 207 aa8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 RSPO1Q2MKA7 263 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 TEX36Q5VZQ5 186 aa8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 NCR3LG1Q68D85 454 aa8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 COLCA1Q6ZS62 124 aa8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 FAM216BQ8N7L0 139 aa8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 C8orf46Q8TAG6 207 aa8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 TMEM239Q8WW34 195 aa8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 ATPIF1Q9UII2 106 aa8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 PRPF19Q9UMS4 504 aaKnown RBP8.45□□□□□ -1.06
CTDNEP1-202ENST00000570380 TRPC5OSA6NMA1 111 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 CTLA4P16410 223 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 AMY2BP19961 511 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 PPIBP23284 216 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 LSM6P62312 80 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 WDR38Q5JTN6 314 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 PAGE3Q5JUK9 113 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 LIAT1Q6ZQX7 453 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 Q6ZS46 218 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 PLPP7Q8NBV4 271 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 SPRYD4Q8WW59 207 aaPredicted RBP8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 SLCO4A1Q96BD0 722 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 MAP6Q96JE9 813 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 CDCA4Q9BXL8 241 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 CAPN7Q9Y6W3 813 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 STARD9Q9P2P6 4700 aa8.44□□□□□ -1.06
CTDNEP1-202ENST00000570380 TEX13CA0A0J9YWL9 993 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 PEX14O75381 377 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 GRPP07492 148 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 LMO1P25800 156 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 HIST1H3AP68431 136 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 IKZF1Q13422 519 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 FHL1Q13642 323 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 TCTEX1D4Q5JR98 221 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 HIST2H3PS2Q5TEC6 136 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 HIST2H3AQ71DI3 136 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 SLC36A1Q7Z2H8 476 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 NAA40Q86UY6 237 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 OR5AU1Q8NGC0 362 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 ACOT11Q8WXI4 607 aaPredicted RBP8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 TAMM41Q96BW9 452 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 OR52B2Q96RD2 323 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 COQ7Q99807 217 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 ADAT1Q9BUB4 502 aaKnown RBP8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 METTL8Q9H825 291 aaKnown RBP8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 SF3B6Q9Y3B4 125 aaKnown RBP8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 MED31Q9Y3C7 131 aa8.43□□□□□ -1.06
CTDNEP1-202ENST00000570380 TRAV27A0A087WT01 109 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 hCG_1807616A0A1W2PRN6 198 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 A6NLC8 198 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 EVPLLA8MZ36 301 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 M0R1W7 72 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 ACOT8O14734 319 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 UBDO15205 165 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 NDUFB3O43676 98 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 GMDSO60547 372 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 CHRM2P08172 466 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 VIMP08670 466 aaKnown RBP8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 KITP10721 976 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 SELLP14151 372 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 MUC1P15941 1255 aaPredicted RBP8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 TGM4P49221 684 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 TAS2R41P59536 307 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 ECH1Q13011 328 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 PIN1Q13526 163 aaPredicted RBP8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 CNN3Q15417 329 aaKnown RBP8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 PCK2Q16822 640 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 MICBQ29980 383 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 TMEM95Q3KNT9 176 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 KRTAP27-1Q3LI81 207 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 MESTQ5EB52 335 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 CCDC121Q6ZUS5 278 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 PGAP1Q75T13 922 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 MAVSQ7Z434 540 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 FUNDC1Q8IVP5 155 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 C11orf53Q8IXP5 236 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 MICU2Q8IYU8 434 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 EIF1ADQ8N9N8 165 aaKnown RBP8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 C11orf65Q8NCR3 313 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 OR51A7Q8NH64 312 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 H1FXQ92522 213 aaKnown RBP8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 DPF1Q92782 380 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 SEH1LQ96EE3 360 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 CHID1Q9BWS9 393 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 PRSS22Q9GZN4 317 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 SLC22A4Q9H015 551 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 MUC13Q9H3R2 512 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 ADA2Q9NZK5 511 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 RIMS3Q9UJD0 308 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 CORO2BQ9UQ03 480 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 AURKCQ9UQB9 309 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 COA3Q9Y2R0 106 aaPredicted RBP8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 NDUFAF1Q9Y375 327 aa8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 NOP16Q9Y3C1 178 aaKnown RBP8.42□□□□□ -1.06
CTDNEP1-202ENST00000570380 TRBV23-1A0A0A0MS06 115 aa8.41□□□□□ -1.06
CTDNEP1-202ENST00000570380 CD300LBA8K4G0 201 aa8.41□□□□□ -1.06
CTDNEP1-202ENST00000570380 POLR3GO15318 223 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms