RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 LRRN1Q6UXK5 716 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 CXXC5Q7LFL8 322 aaKnown RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 RELL2Q8NC24 303 aaPredicted RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 ANKRD9Q96BM1 317 aaPredicted RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 OR52D1Q9H346 318 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 TCEAL2Q9H3H9 227 aaPredicted RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 GPN1Q9HCN4 374 aaPredicted RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 HINT3Q9NQE9 182 aaKnown RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 SIRT4Q9Y6E7 314 aaPredicted RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 XIRP2A4UGR9 3374 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 SPTY2D1-AS1A0A0U1RR47 76 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 COLCA2A8K830 154 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 ARPC1BO15143 372 aaKnown RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 TSPAN2O60636 221 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 RCBTB2O95199 551 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 HCKP08631 526 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 CT62P0C5K7 136 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 ZGLP1P0C6A0 271 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 ZNF806P0C7X5 589 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 GKN3PP0CG01 181 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 GLB1P16278 677 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 BMP7P18075 431 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 SNRPEP62304 92 aaKnown RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 ZNF345Q14585 488 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 EXOSC7Q15024 291 aaKnown RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 SLC25A35Q3KQZ1 300 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 ZNF613Q6PF04 617 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 TMPRSS11FQ6ZWK6 438 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 SLC36A1Q7Z2H8 476 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 MISPQ8IVT2 679 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 CDK20Q8IZL9 346 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 DOK4Q8TEW6 326 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 SMAP2Q8WU79 429 aaPredicted RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 PGAM5Q96HS1 289 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 ZNF559Q9BR84 538 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 C2orf88Q9BSF0 95 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 AUNIPQ9H7T9 357 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 NOX3Q9HBY0 568 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 UNC80Q8N2C7 3258 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 PRR23D1E9PI22 279 aaPredicted RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 BHLHE40O14503 412 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 PLPP2O43688 288 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 MED6O75586 246 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 NDUFB6O95139 128 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 SLC2A10O95528 541 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 RLN1P04808 185 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 SERPINA5P05154 406 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 PRR23D2P0DMB1 279 aaPredicted RBP7.16□□□□□ -1.26
TCF4-246ENST00000570287 MAKP20794 623 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 AMZ1Q400G9 498 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 DNM1P46Q6ZS02 220 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 SMRP1Q8NCR6 262 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 BBS1Q8NFJ9 593 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 SLC25A28Q96A46 364 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 TMEM27Q9HBJ8 222 aa7.16□□□□□ -1.26
TCF4-246ENST00000570287 NPIPA5A0A0B4J1W7 369 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 TRAV1-2A0A0B4J238 106 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 ANKRD20A5PA0PJZ0 165 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 GXYLT2A0PJZ3 443 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 NPIPA7E9PJI5 369 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 F8WDY8 70 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 IMPA2O14732 288 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 TCAPO15273 167 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 RDH16O75452 317 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 ZFPL1O95159 310 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 SPDEFO95238 335 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 IGHV2-5P01817 119 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 CELA2BP08218 269 aaPredicted RBP7.15□□□□□ -1.26
TCF4-246ENST00000570287 NPIPA8P0DM63 369 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 CTSEP14091 401 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 APOBEC3AP31941 199 aaPredicted RBP7.15□□□□□ -1.26
TCF4-246ENST00000570287 PMELP40967 661 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 SNU13P55769 128 aaKnown RBP7.15□□□□□ -1.26
TCF4-246ENST00000570287 FXYD6P3P58550 94 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 AP3S2P59780 193 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 PPIAP62937 165 aaKnown RBP7.15□□□□□ -1.26
TCF4-246ENST00000570287 CXADRP78310 365 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 HHEXQ03014 270 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 FZD2Q14332 565 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 ZNF791Q3KP31 576 aaPredicted RBP7.15□□□□□ -1.26
TCF4-246ENST00000570287 C19orf54Q5BKX5 351 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 NIPAL3Q6P499 406 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 TMEM108Q6UXF1 575 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 MEPCEQ7L2J0 689 aaKnown RBP7.15□□□□□ -1.26
TCF4-246ENST00000570287 OR52R1Q8NGF1 315 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 PFN4Q8NHR9 129 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 TRIB1Q96RU8 372 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 LMF2Q9BU23 707 aaKnown RBP7.15□□□□□ -1.26
TCF4-246ENST00000570287 IL20RAQ9UHF4 553 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 MED31Q9Y3C7 131 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 SCN2AQ99250 2005 aa7.15□□□□□ -1.26
TCF4-246ENST00000570287 RFPL4AA6NLU0 287 aa7.15□□□□□ -1.27
TCF4-246ENST00000570287 RFPL4AL1F8VTS6 287 aa7.15□□□□□ -1.27
TCF4-246ENST00000570287 GABARAPH6UMI1 98 aa7.15□□□□□ -1.27
TCF4-246ENST00000570287 FGF16O43320 207 aa7.15□□□□□ -1.27
TCF4-246ENST00000570287 OR10H2O60403 315 aa7.15□□□□□ -1.27
TCF4-246ENST00000570287 ST6GAL1P15907 406 aa7.15□□□□□ -1.27
TCF4-246ENST00000570287 TBXA2RP21731 343 aa7.15□□□□□ -1.27
TCF4-246ENST00000570287 BLKP51451 505 aa7.15□□□□□ -1.27
TCF4-246ENST00000570287 RAB5BP61020 215 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms