RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 OR10G2Q8NGC3 310 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SPSB4Q96A44 273 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 KCNJ15Q99712 375 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 WDR76Q9H967 626 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 MMP26Q9NRE1 261 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 MRPL15Q9P015 296 aaKnown RBP14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 U3KQV3 271 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 TENM1Q9UKZ4 2725 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 TVP23AA6NH52 213 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 RIIAD1A6NNX1 92 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 CD300LBA8K4G0 201 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZNF878C9JN71 531 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 TRIM77I1YAP6 450 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZNF3P17036 446 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 GRK5P34947 590 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 PMELP40967 661 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 PAX8Q06710 450 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 PPP1R8Q12972 351 aaKnown RBP14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SNAI3Q3KNW1 292 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 LYPD4Q6UWN0 246 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 MRPL21Q7Z2W9 205 aaKnown RBP14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 MOGAT3Q86VF5 341 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ADGRG5Q8IZF4 528 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 OR9Q1Q8NGQ5 310 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZNF420Q8TAQ5 688 aaPredicted RBP14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SLCO4A1Q96BD0 722 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 LRGUKQ96M69 825 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 NIPSNAP1Q9BPW8 284 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 TMEM246Q9BRR3 403 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 TOR3AQ9H497 397 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 NTN4Q9HB63 628 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ARMC1Q9NVT9 282 aa14.31□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZNF593O00488 134 aaPredicted RBP14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 DYNC1I1O14576 645 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 XRCC2O43543 280 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 CYB5R3P00387 301 aaPredicted RBP14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 HLA-DPB1P04440 258 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 FPR2P25090 351 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 RPS27P42677 84 aaKnown RBP14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 GRB2P62993 217 aaKnown RBP14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZNF92Q03936 586 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 DCDC5Q6ZRR9 648 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SPERTQ8NA61 448 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 OR51L1Q8NGJ5 315 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 TEX47Q8TBZ9 253 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 GIPC3Q8TF64 312 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SPRYD4Q8WW59 207 aaPredicted RBP14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SLAMF6Q96DU3 332 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 NEIL1Q96FI4 390 aaPredicted RBP14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 FEVQ99581 238 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 CHID1Q9BWS9 393 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SSBP3Q9BWW4 388 aaPredicted RBP14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 OR5V1Q9UGF6 321 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 PPIAL4AQ9Y536 164 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 AUP1Q9Y679 476 aa14.3□□□□□ -0.12
MAP1LC3B-208ENST00000570189 TMEM89A2RUT3 159 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 PHYHO14832 338 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SOX14O95416 240 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 CST1P01037 141 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 APOC1P02654 83 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 GYPBP06028 91 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 RPS2P15880 293 aaKnown RBP14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 RBMXP38159 391 aaKnown RBP14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 DDOSTP39656 456 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SLC15A1P46059 708 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 GLYATL3Q5SZD4 288 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 C9orf139Q6ZV77 190 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZNF771Q7L3S4 317 aaPredicted RBP14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 BPIFB2Q8N4F0 458 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZNF511Q8NB15 262 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 OR11L1Q8NGX0 322 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 RNF133Q8WVZ7 376 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 PLEKHA8Q96JA3 519 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SLC6A7Q99884 636 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 COPS4Q9BT78 406 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 MRI1Q9BV20 369 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 FAM53CQ9NYF3 392 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 NUP50Q9UKX7 468 aa14.29□□□□□ -0.12
MAP1LC3B-208ENST00000570189 IGHV2-70DA0A0C4DH43 119 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 DHRS12A0PJE2 317 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 GLCEO94923 617 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SPARCP09486 303 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ANOS1P23352 680 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 PSMB10P40306 273 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 MZT1Q08AG7 82 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ARMCX4Q5H9R4 360 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 KLF17Q5JT82 389 aaPredicted RBP14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 LRRN1Q6UXK5 716 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 DOK3Q7L591 496 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 NLRC3Q7RTR2 1065 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 PRSS45Q7RTY3 260 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZDHHC22Q8N966 263 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 CANT1Q8WVQ1 401 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 CCDC124Q96CT7 223 aaKnown RBP14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 CLPTM1LQ96KA5 538 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ADAT1Q9BUB4 502 aaKnown RBP14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SP140LQ9H930 580 aa14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZMAT3Q9HA38 289 aaKnown RBP14.28□□□□□ -0.12
MAP1LC3B-208ENST00000570189 FAM20BO75063 409 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 CLUP10909 449 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms