RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PRR32B1ATL7 298 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 RAB27BO00194 218 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 AGRPO00253 132 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 ABCD4O14678 606 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 OIP5O43482 229 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 ONECUT2O95948 504 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 IGHEP01854 428 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 CELA2BP08218 269 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-250ENST00000568290 TMIGD3P0DMS9 266 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-250ENST00000568290 HIST1H1DP16402 221 aaKnown RBP6.8□□□□□ -1.32
ATXN3-250ENST00000568290 CCL1P22362 96 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 CTSSP25774 331 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 RBMXP38159 391 aaKnown RBP6.8□□□□□ -1.32
ATXN3-250ENST00000568290 CASRP41180 1078 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 GFERP55789 205 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 BIDP55957 195 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 SNRPNP63162 240 aaKnown RBP6.8□□□□□ -1.32
ATXN3-250ENST00000568290 MC2RQ01718 297 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 DMWDQ09019 674 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 INPP5JQ15735 1006 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-250ENST00000568290 DEFB133Q30KQ1 61 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 NUP210LQ5VU65 1888 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 FAAP20Q6NZ36 180 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 OPN5Q6U736 354 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 TFAP2EQ6VUC0 442 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 HOGA1Q86XE5 327 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 ANGPTL5Q86XS5 388 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 BAP18Q8IXM2 172 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 ARMC10Q8N2F6 343 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 METTL27Q8N6F8 245 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF283Q8N7M2 679 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 CLRN3Q8NCR9 226 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 OR52B4Q8NGK2 314 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 OR1S1Q8NH92 325 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 OR1L3Q8NH93 324 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 STT3BQ8TCJ2 826 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 PPP1R1CQ8WVI7 109 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 GCDHQ92947 438 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-250ENST00000568290 NAT6Q93015 286 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 FBXW5Q969U6 566 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 CNTNAP3BQ96NU0 1288 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 MDFIQ99750 246 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 SYT3Q9BQG1 590 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF416Q9BWM5 594 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 PHF7Q9BWX1 381 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-250ENST00000568290 REG4Q9BYZ8 158 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 CHST6Q9GZX3 395 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 OR10A2Q9H208 303 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 CNTD2Q9H8S5 307 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 LMAN1LQ9HAT1 526 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 KLHL13Q9P2N7 655 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 NDRG3Q9UGV2 375 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 MRPS18BQ9Y676 258 aaKnown RBP6.8□□□□□ -1.32
ATXN3-250ENST00000568290 KCNMB2Q9Y691 235 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 LRP4O75096 1905 aa6.8□□□□□ -1.32
ATXN3-250ENST00000568290 FANCMQ8IYD8 2048 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SNRNP200O75643 2136 aaKnown RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 TRBV6-7A0A0A0MS04 114 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 TMEM235A6NFC5 223 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 H0YC42 278 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 MS4A18H0YCH9 400 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 H3BMH7 237 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 M0QYG6 137 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 P2RY10O00398 339 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 JTBO76095 146 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SFT2D2O95562 160 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 PNPP00491 289 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 APOC3P02656 99 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 CRHP06850 196 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF735P0CB33 412 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF250P15622 560 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 AMY2BP19961 511 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 RAB5CP51148 216 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 DUSP3P51452 185 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 EFNB2P52799 333 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 CLDN6P56747 220 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SRPXP78539 464 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 DEFA5Q01523 94 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 MFGE8Q08431 387 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 BTN1A1Q13410 526 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 MELKQ14680 651 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF169Q14929 603 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 CNN3Q15417 329 aaKnown RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 EXT1Q16394 746 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 MS4A18Q3C1V0 323 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 CHRFAM7AQ494W8 412 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 NKAIN1Q4KMZ8 207 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ELP2Q6IA86 826 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 FAM109BQ6ICB4 259 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 JMJD6Q6NYC1 403 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF529Q6P280 563 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 PRSS54Q6PEW0 395 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 NHLRC1Q6VVB1 395 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ABHD12BQ7Z5M8 362 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ANKRD37Q7Z713 158 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SGPP2Q8IWX5 399 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ACBD4Q8NC06 268 aa6.79□□□□□ -1.32
ATXN3-250ENST00000568290 ZBTB44Q8NCP5 570 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms