RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 SGTBQ96EQ0 304 aa9.53□□□□□ -0.88
CLK3-222ENST00000568232 WNT10AQ9GZT5 417 aa9.53□□□□□ -0.88
CLK3-222ENST00000568232 EVA1AQ9H8M9 152 aa9.53□□□□□ -0.88
CLK3-222ENST00000568232 RAB18Q9NP72 206 aa9.53□□□□□ -0.88
CLK3-222ENST00000568232 INPP5EQ9NRR6 644 aa9.53□□□□□ -0.88
CLK3-222ENST00000568232 C1orf123Q9NWV4 160 aa9.53□□□□□ -0.88
CLK3-222ENST00000568232 HAO1Q9UJM8 370 aa9.53□□□□□ -0.88
CLK3-222ENST00000568232 J3QW42 95 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 RER1O15258 196 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 CHRM2P08172 466 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 IDO1P14902 403 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 CTXN1P60606 82 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 ACSM1Q08AH1 577 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 GK2Q14410 553 aaPredicted RBP9.52□□□□□ -0.89
CLK3-222ENST00000568232 OR8G1Q15617 311 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 HCP5Q6MZN7 132 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 Q6ZS46 218 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 Q8N2B8 174 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 FAM216BQ8N7L0 139 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 LRRC8CQ8TDW0 803 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 ZBTB9Q96C00 473 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 MAP6Q96JE9 813 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 ASCL2Q99929 193 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 WACQ9BTA9 647 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 HCAR1Q9BXC0 346 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 CDCA4Q9BXL8 241 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 MEGF9Q9H1U4 602 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 TMEM38AQ9H6F2 299 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 TRIM36Q9NQ86 728 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 ZIM2Q9NZV7 527 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 KAAG1Q9UBP8 84 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 CAPN7Q9Y6W3 813 aa9.52□□□□□ -0.89
CLK3-222ENST00000568232 HUWE1Q7Z6Z7 4374 aaKnown RBP9.52□□□□□ -0.89
CLK3-222ENST00000568232 M0QX08 132 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 PEX14O75381 377 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 GRPP07492 148 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 CCDC159P0C7I6 412 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 FAHP16930 419 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 LMO1P25800 156 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 CD83Q01151 205 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 IKZF1Q13422 519 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 AQP6Q13520 282 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 RSPO1Q2MKA7 263 aaPredicted RBP9.51□□□□□ -0.89
CLK3-222ENST00000568232 TMEM95Q3KNT9 176 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 WDR38Q5JTN6 314 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 CCDC121Q6ZUS5 278 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 FNDC8Q8TC99 324 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 LIPHQ8WWY8 451 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 H1FXQ92522 213 aaKnown RBP9.51□□□□□ -0.89
CLK3-222ENST00000568232 SLCO4A1Q96BD0 722 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 SEH1LQ96EE3 360 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 CHID1Q9BWS9 393 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 SDR39U1Q9NRG7 319 aaPredicted RBP9.51□□□□□ -0.89
CLK3-222ENST00000568232 VAPAQ9P0L0 249 aa9.51□□□□□ -0.89
CLK3-222ENST00000568232 PRPF19Q9UMS4 504 aaKnown RBP9.51□□□□□ -0.89
CLK3-222ENST00000568232 hCG_1807616A0A1W2PRN6 198 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 DUS4LO95620 317 aaKnown RBP9.5□□□□□ -0.89
CLK3-222ENST00000568232 PTBP3O95758 552 aaKnown RBP9.5□□□□□ -0.89
CLK3-222ENST00000568232 LHBP01229 141 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 SELLP14151 372 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 CD247P20963 164 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 RAB13P51153 203 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 CBX1P83916 185 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 STX3Q13277 289 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 TCTEX1D4Q5JR98 221 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 LRIF1Q5T3J3 769 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 TEX36Q5VZQ5 186 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 NAA40Q86UY6 237 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 MICU2Q8IYU8 434 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 LRRC75AQ8NAA5 344 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 OR5AU1Q8NGC0 362 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 TMEM239Q8WW34 195 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 SPRYD4Q8WW59 207 aaPredicted RBP9.5□□□□□ -0.89
CLK3-222ENST00000568232 ADAT1Q9BUB4 502 aaKnown RBP9.5□□□□□ -0.89
CLK3-222ENST00000568232 MUC13Q9H3R2 512 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 ADA2Q9NZK5 511 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 LGALS13Q9UHV8 139 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 HIF3AQ9Y2N7 669 aa9.5□□□□□ -0.89
CLK3-222ENST00000568232 STARD9Q9P2P6 4700 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 TRBV23-1A0A0A0MS06 115 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 A6NIZ1 184 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 A6NLC8 198 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 ACOT8O14734 319 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 BIRC5O15392 142 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 TFF1P04155 84 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 KITP10721 976 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 CTLA4P16410 223 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 GPX2P18283 190 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 AMY2BP19961 511 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 RAP1BP61224 184 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 RAP1AP62834 184 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 ECH1Q13011 328 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 PLA1AQ53H76 456 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 PAGE3Q5JUK9 113 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 NCR3LG1Q68D85 454 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 COLCA1Q6ZS62 124 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 CROCCP2Q86T23 111 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 TMEM219Q86XT9 240 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 MREGQ8N565 214 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 DTX3Q8N9I9 347 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms