RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ACBD7Q8N6N7 88 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 YIPF7Q8N8F6 280 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 CMBLQ96DG6 245 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 LGALS12Q96DT0 336 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 PGAM5Q96HS1 289 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 ANKRD60Q9BZ19 345 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 CXXC4Q9H2H0 198 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 RASSF4Q9H2L5 321 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 MRPS18AQ9NVS2 196 aaKnown RBP10.42□□□□□ -0.74
SF3B3-208ENST00000567250 MYEF2Q9P2K5 600 aaKnown RBP10.42□□□□□ -0.74
SF3B3-208ENST00000567250 AASSQ9UDR5 926 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 PURGQ9UJV8 347 aaKnown RBP10.42□□□□□ -0.74
SF3B3-208ENST00000567250 ITGB1BP2Q9UKP3 347 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 ZDHHC8Q9ULC8 765 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 NOP16Q9Y3C1 178 aaKnown RBP10.42□□□□□ -0.74
SF3B3-208ENST00000567250 OTOGQ6ZRI0 2925 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 RTTNQ86VV8 2226 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 CCDC168Q8NDH2 2452 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 TMEM269A0A1B0GVZ9 245 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 C17orf100A8MU93 164 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 LOC110117498-PIK3R3F6TDL0 507 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 PSMD9O00233 223 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 ADRA2AP08913 450 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 GNAO1P09471 354 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 TACSTD2P09758 323 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 CSF3P09919 207 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 MYL12AP19105 171 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 TNFSF4P23510 183 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 ZNF81P51508 661 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 MMP16P51512 607 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 EFNA4P52798 201 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 PSG7Q13046 419 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 GK2Q14410 553 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-208ENST00000567250 FAM209AQ5JX71 171 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 GLYATL3Q5SZD4 288 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 PRSS57Q6UWY2 283 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 KCTD20Q7Z5Y7 419 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 NAA40Q86UY6 237 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 HAVCR2Q8TDQ0 301 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 ITFG2Q969R8 447 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 HAVCR1Q96D42 359 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 SORCS2Q96PQ0 1159 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 TMUB1Q9BVT8 246 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 POFUT1Q9H488 388 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 Q9H521 79 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 AMBNQ9NP70 447 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 BRD7Q9NPI1 651 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 RAB26Q9ULW5 256 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 N6AMT1Q9Y5N5 214 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 R4GMQ9 66 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 CHD3Q12873 2000 aaKnown RBP10.41□□□□□ -0.74
SF3B3-208ENST00000567250 TANC2Q9HCD6 1990 aa10.41□□□□□ -0.74
SF3B3-208ENST00000567250 EFCAB10A6NFE3 127 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 GGT3PA6NGU5 568 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 METTL15A6NJ78 407 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 CYSRT1A8MQ03 144 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 IQCF6A8MYZ5 107 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 J3QRE1 110 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 IGHV4-39P01824 125 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 IGHA1P01876 353 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 ADH4P08319 380 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 NAT2P11245 290 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 PIPP12273 146 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-208ENST00000567250 DCKP27707 260 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 MMP15P51511 669 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 CSNK2BP67870 215 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 ZNF85Q03923 595 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 MRPL28Q13084 256 aaKnown RBP10.4□□□□□ -0.74
SF3B3-208ENST00000567250 CDK5R2Q13319 367 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 HLXQ14774 488 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-208ENST00000567250 GFOD2Q3B7J2 385 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 ALKBH6Q3KRA9 238 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 CDONQ4KMG0 1287 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 BCL2L15Q5TBC7 163 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 SSX6Q7RTT6 188 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 PRSS45Q7RTY3 260 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 COMMD2Q86X83 199 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 EGFL6Q8IUX8 553 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 SYS1Q8N2H4 156 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 OR2AE1Q8NHA4 323 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 FBLIM1Q8WUP2 373 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 SPRYD4Q8WW59 207 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-208ENST00000567250 SPSB4Q96A44 273 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 REEP6Q96HR9 211 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 ZNF184Q99676 751 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-208ENST00000567250 ALG8Q9BVK2 526 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 JAM3Q9BX67 310 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 KRTAP3-3Q9BYR6 98 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 KRTAP3-2Q9BYR7 98 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 SLC22A4Q9H015 551 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 TPK1Q9H3S4 243 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 FGF20Q9NP95 211 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-208ENST00000567250 FAM206AQ9NX38 181 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 NKIRAS2Q9NYR9 191 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 CNOT2Q9NZN8 540 aaKnown RBP10.4□□□□□ -0.74
SF3B3-208ENST00000567250 NUFIP1Q9UHK0 495 aaKnown RBP10.4□□□□□ -0.74
SF3B3-208ENST00000567250 MRM2Q9UI43 246 aaKnown RBP10.4□□□□□ -0.74
SF3B3-208ENST00000567250 GNG8Q9UK08 70 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 GTF2A1LQ9UNN4 478 aa10.4□□□□□ -0.74
SF3B3-208ENST00000567250 SNX5Q9Y5X3 404 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms