RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CCL3P10147 92 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 COX6A1P12074 109 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CPMP14384 443 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CPA3P15088 417 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TPSB2P20231 275 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 RPS3P23396 243 aaKnown RBP eCLIP0.92□□□□□ -2.26
SMG1-212ENST00000566328 CXCR2P25025 360 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CD82P27701 267 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 GCAP28676 217 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CD34P28906 385 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CMPK1P30085 196 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CASQ1P31415 396 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SHMT2P34897 504 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 FDFT1P37268 417 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 FRKP42685 505 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 MAGEA3P43357 314 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 MAGEA5P43359 124 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SLCO1A2P46721 670 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 DNASE1L1P49184 302 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TTPAP49638 278 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CCR8P51685 355 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 LIM2P55344 173 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 FBXW4P57775 412 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 OR4D2P58180 307 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TBPL1P62380 186 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 DR1Q01658 176 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SRYQ05066 204 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ASPHQ12797 758 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 RPA4Q13156 261 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CHIT1Q13231 466 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SLAMF1Q13291 335 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 DDX39BQ13838 428 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 ITIH4Q14624 930 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 EXOSC7Q15024 291 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 TGFBIQ15582 683 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TPSAB1Q15661 275 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 UAP1Q16222 522 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 NNATQ16517 81 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SLC5A12Q1EHB4 618 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ABCA11PQ4W5N1 156 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TRMT12Q53H54 448 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 DNAJC21Q5F1R6 531 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 PRAMEF20Q5VT98 475 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ARMC3Q5W041 872 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 DUPD1Q68J44 220 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 PDPK2PQ6A1A2 396 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ANKRD26P1Q6NSI1 321 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TTC23LQ6PF05 361 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TMEM205Q6UW68 189 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SBSNQ6UWP8 590 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ISLR2Q6UXK2 745 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 DNM1P46Q6ZS02 220 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 Q6ZS92 163 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 RNF165Q6ZSG1 346 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 NLRP9Q7RTR0 991 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 GALNTL5Q7Z4T8 443 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 LINC00523Q86TU6 105 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ASPGQ86U10 573 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 YRDCQ86U90 279 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 ZSCAN30Q86W11 494 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 RPS19BP1Q86WX3 136 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 VSIG1Q86XK7 387 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 AQP12AQ8IXF9 295 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 KLHDC8AQ8IYD2 350 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CLEC4FQ8N1N0 589 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CA13Q8N1Q1 262 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ZADH2Q8N4Q0 377 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TEX9Q8N6V9 391 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CEP112Q8N8E3 955 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SNX31Q8N9S9 440 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 MFSD9Q8NBP5 474 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CCDC112Q8NEF3 446 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SPATA4Q8NEY3 305 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CD200R1Q8TD46 325 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 MCOLN3Q8TDD5 553 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 RNASE8Q8TDE3 154 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 ACTRT1Q8TDG2 376 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 PYROXD1Q8WU10 500 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 KCTD4Q8WVF5 259 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 UBE2Q2Q8WVN8 375 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ITLN2Q8WWU7 325 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 HAS2Q92819 552 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 BCL2L2Q92843 193 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 NCLNQ969V3 563 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.92□□□□□ -2.26
SMG1-212ENST00000566328 RERGQ96A58 199 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 TM4SF18Q96CE8 201 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 LRRC45Q96CN5 670 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 MS4A6EQ96DS6 147 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 RMI2Q96E14 147 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 C11orf24Q96F05 449 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 RNF185Q96GF1 192 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CXorf58Q96LI9 332 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 C16orf45Q96MC5 204 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 JSRP1Q96MG2 331 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 KCNA7Q96RP8 456 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TXN2Q99757 166 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 RHOXF2Q9BQY4 288 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ERP44Q9BS26 406 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 OSBPL11Q9BXB4 747 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms