RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ZNF485Q8NCK3 441 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 NUP37Q8NFH4 326 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 OR8B12Q8NGG6 310 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 OR5AK2Q8NH90 309 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 SLC25A40Q8TBP6 338 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 ITFG2Q969R8 447 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 SGK3Q96BR1 496 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 SMIM19Q96E16 107 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 REEP6Q96HR9 211 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 G6PC2Q9NQR9 355 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 PTTG3PQ9NZH4 202 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 FRRS1LQ9P0K9 344 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 SLC22A13Q9Y226 551 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 ZNF281Q9Y2X9 895 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 LSM2Q9Y333 95 aaKnown RBP6.72□□□□□ -1.33
CDH1-208ENST00000565810 STARD10Q9Y365 291 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 CMAHPQ9Y471 501 aa6.72□□□□□ -1.33
CDH1-208ENST00000565810 PNMA8CA0A1B0GUJ8 204 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 GGT3PA6NGU5 568 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 TRIM64CA6NLI5 447 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 OR4C45A6NMZ5 311 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 H3BSA7 217 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 P2RY10O00398 339 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 CCRL2O00421 344 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 SRSF10O75494 262 aaKnown RBP6.71□□□□□ -1.34
CDH1-208ENST00000565810 INMTO95050 263 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 LALBAP00709 142 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 SERPINA3P01011 423 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 ISG15P05161 165 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 CD1AP06126 327 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 SMIM18P0DKX4 95 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 CPEP16870 476 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 JUNBP17275 347 aaPredicted RBP6.71□□□□□ -1.34
CDH1-208ENST00000565810 CD53P19397 219 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 ACHEP22303 614 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 PSMA1P25786 263 aaKnown RBP6.71□□□□□ -1.34
CDH1-208ENST00000565810 DDOSTP39656 456 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 FABP6P51161 128 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 NANOS3P60323 173 aaKnown RBP6.71□□□□□ -1.34
CDH1-208ENST00000565810 NKX6-1P78426 367 aaPredicted RBP6.71□□□□□ -1.34
CDH1-208ENST00000565810 HGFACQ04756 655 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 SPOCK1Q08629 439 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 TPBGQ13641 420 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 TRAM1Q15629 374 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 TSTQ16762 297 aaKnown RBP6.71□□□□□ -1.34
CDH1-208ENST00000565810 ODF4Q2M2E3 257 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 YIF1BQ5BJH7 314 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 GLYATL3Q5SZD4 288 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 SPATA46Q5T0L3 261 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 SYT6Q5T7P8 510 aaPredicted RBP6.71□□□□□ -1.34
CDH1-208ENST00000565810 LIPKQ5VXJ0 399 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 DMKNQ6E0U4 476 aaPredicted RBP6.71□□□□□ -1.34
CDH1-208ENST00000565810 RFPL4BQ6ZWI9 263 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 DOK3Q7L591 496 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 ZNF101Q8IZC7 436 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 FTMTQ8N4E7 242 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 MS4A15Q8N5U1 240 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 ZFP41Q8N8Y5 198 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 KBTBD8Q8NFY9 601 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 SYNPRQ8TBG9 265 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 OR51E1Q8TCB6 317 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 GPR148Q8TDV2 347 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 GHSRQ92847 366 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 MUL1Q969V5 352 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 PPP1R14AQ96A00 147 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 CMBLQ96DG6 245 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 FAM71F1Q96KD3 344 aaPredicted RBP6.71□□□□□ -1.34
CDH1-208ENST00000565810 PSMG3-AS1Q96PY0 264 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 PDCD1LG2Q9BQ51 273 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 OR2J1Q9GZK6 312 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 ZNF442Q9H7R0 627 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 GPR84Q9NQS5 396 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 CA10Q9NS85 328 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 CISD1Q9NZ45 108 aaKnown RBP6.71□□□□□ -1.34
CDH1-208ENST00000565810 DUSP13Q9UII6 198 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 ST6GALNAC2Q9UJ37 374 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 GPR160Q9UJ42 338 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 HHLA2Q9UM44 414 aa6.71□□□□□ -1.34
CDH1-208ENST00000565810 COL12A1Q99715 3063 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 SHISA9B4DS77 424 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 E7EQL1 145 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 SIAH2O43255 324 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 ZFPL1O95159 310 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 TTRP02766 147 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 HLA-DPB1P04440 258 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 CD2P06729 351 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 OR4A8P0C604 315 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 RAC2P15153 192 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 APOBEC3AP31941 199 aaPredicted RBP6.7□□□□□ -1.34
CDH1-208ENST00000565810 THBS4P35443 961 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 KIR3DL2P43630 455 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 MAP2K3P46734 347 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 RPL5P46777 297 aaKnown RBP6.7□□□□□ -1.34
CDH1-208ENST00000565810 ZNF92Q03936 586 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 RIPPLY1Q0D2K3 151 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 GK2Q14410 553 aaPredicted RBP6.7□□□□□ -1.34
CDH1-208ENST00000565810 ZNF672Q499Z4 452 aaPredicted RBP6.7□□□□□ -1.34
CDH1-208ENST00000565810 MBNL2Q5VZF2 373 aaKnown RBP6.7□□□□□ -1.34
CDH1-208ENST00000565810 XAF1Q6GPH4 301 aa6.7□□□□□ -1.34
CDH1-208ENST00000565810 FBXW12Q6X9E4 464 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms