RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 FAM181BA6NEQ2 426 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 CD300LBA8K4G0 201 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 SRRM5B3KS81 715 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 PHYHO14832 338 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 IDH3BO43837 385 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 GADD45GO95257 159 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 RENP00797 406 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 SFTPBP07988 381 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 CA6P23280 308 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 OMGP23515 440 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 OTX1P32242 354 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-213ENST00000565173 MSX2P35548 267 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-213ENST00000565173 RPS27P42677 84 aaKnown RBP7.12□□□□□ -1.27
CAPN3-213ENST00000565173 TPTEP56180 551 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 SMIM11AP58511 58 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 BPIFB3P59826 476 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 RELBQ01201 579 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 SRSF4Q08170 494 aaKnown RBP7.12□□□□□ -1.27
CAPN3-213ENST00000565173 MALLQ13021 153 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 KRT72Q14CN4 511 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 SLC36A3Q495N2 470 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 SFRP4Q6FHJ7 346 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-213ENST00000565173 ZNF620Q6ZNG0 422 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 PLPP7Q8NBV4 271 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 SDR9C7Q8NEX9 313 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 OR2AJ1Q8NGZ0 328 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 FANK1Q8TC84 345 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 BCAS4Q8TDM0 211 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 SPRYD4Q8WW59 207 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-213ENST00000565173 CMTM5Q96DZ9 223 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 TBX15Q96SF7 602 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 IFT27Q9BW83 186 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 SMURF1Q9HCE7 757 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 SPAG4Q9NPE6 437 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 KRCC1Q9NPI7 259 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-213ENST00000565173 C1RLQ9NZP8 487 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 CD300AQ9UGN4 299 aa7.12□□□□□ -1.27
CAPN3-213ENST00000565173 NOTCH1P46531 2555 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 ZNF879B4DU55 563 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 C3orf80F5H4A9 247 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 M0R135 149 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 BHLHE40O14503 412 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 ENSAO43768 121 aaKnown RBP7.11□□□□□ -1.27
CAPN3-213ENST00000565173 OR10H3O60404 316 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 GMDSO60547 372 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 LHBP01229 141 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 LIPFP07098 398 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 HSD17B1P14061 328 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 IRF2P14316 349 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 NOS3P29474 1203 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 PRDX6P30041 224 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 PYCR1P32322 319 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 CFHR2P36980 270 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 NPY4RP50391 375 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 HMGA2P52926 109 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 DEFA6Q01524 100 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 SPIBQ01892 262 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.11□□□□□ -1.27
CAPN3-213ENST00000565173 TSPAN31Q12999 210 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 OR8G1Q15617 311 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 OCLNQ16625 522 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 PCK2Q16822 640 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 PDLIM3Q53GG5 364 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-213ENST00000565173 GLYATL3Q5SZD4 288 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 SLC35F1Q5T1Q4 408 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 GPR157Q5UAW9 335 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 RUSC1-AS1Q66K80 236 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 PGBD2Q6P3X8 592 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 LYPD4Q6UWN0 246 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 SPATC1Q76KD6 591 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 KIR3DL3Q8N743 410 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 OR11L1Q8NGX0 322 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 OR2AE1Q8NHA4 323 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 GNPDA2Q8TDQ7 276 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 ZNF799Q96GE5 643 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 CHIAQ9BZP6 476 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 SLC22A4Q9H015 551 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 RASSF4Q9H2L5 321 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 EGLN3Q9H6Z9 239 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 FN3KRPQ9HA64 309 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 IL1RAPQ9NPH3 570 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 NOX4Q9NPH5 578 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 ADA2Q9NZK5 511 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 PDP1Q9P0J1 537 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-213ENST00000565173 RNF7Q9UBF6 113 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 KCNG2Q9UJ96 466 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 V9GYQ6 96 aa7.11□□□□□ -1.27
CAPN3-213ENST00000565173 A0A1B0GUS0 222 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 OOEPA6NGQ2 149 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 TVP23AA6NH52 213 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 LGALS8O00214 317 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 P2RY10O00398 339 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 TOX4O94842 621 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 HLA-DQA2P01906 255 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 MELTFP08582 738 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 RRM2P31350 389 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 IFNGR2P38484 337 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 KRTAP10-3P60369 221 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 CD276Q5ZPR3 534 aa7.1□□□□□ -1.27
CAPN3-213ENST00000565173 FIP1L1Q6UN15 594 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms