RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 OOSP2Q86WS3 158 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 CATSPERDQ86XM0 798 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 WDFY1Q8IWB7 410 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ELSPBP1Q96BH3 223 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ADAT3Q96EY9 351 aaPredicted RBP18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TAF9BQ9HBM6 251 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 NOSIPQ9Y314 301 aaKnown RBP18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 IGKV1D-43A0A0B4J1Z2 117 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 B4DGG1 531 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 NME2P1O60361 137 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 RNH1P13489 461 aaKnown RBP18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SCAND1P57086 179 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF117Q03924 483 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 FAM24BQ8N5W8 94 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 FGF14Q92915 247 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 UNC13CQ8NB66 2214 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SSX5O60225 188 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF354AO60765 605 aaPredicted RBP18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 MELTFP08582 738 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 COL9A1P20849 921 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 PTAFRP25105 342 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 AQP3Q92482 292 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 C8orf44Q96CB5 159 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TOX2Q96NM4 488 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 NUDT22Q9BRQ3 303 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 C5orf66Q9H5L9 145 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 MED29Q9NX70 200 aa18.28■□□□□ 0.52
MAP1LC3B-206ENST00000564844 CA3P07451 260 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 HOXB2P14652 356 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 EMP2P54851 167 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF616Q08AN1 781 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 C9orf152Q5JTZ5 239 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 PARM1Q6UWI2 310 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 Q6ZRG5 221 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 HIST1H2BAQ96A08 127 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 PLA2G2EQ9NZK7 142 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 A0A0J9YY10 115 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 LINC01553A4QN01 128 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF217O75362 1048 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 C1QL1O75973 258 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF823P16415 610 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ITGA3P26006 1051 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 CEBPGP53567 150 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ALG11Q2TAA5 492 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TMEM196Q5HYL7 178 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 PGAP1Q75T13 922 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 PMM1Q92871 262 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SLC17A5Q9NRA2 495 aa18.27■□□□□ 0.52
MAP1LC3B-206ENST00000564844 F8VVB4 439 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 F8VWA3 439 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 CLDN4O14493 209 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 TMEM127O75204 238 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 LY86O95711 162 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 IL2RAP01589 272 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 IFNA4P05014 189 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 HNRNPA1P09651 372 aaKnown RBP eCLIP18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 CAV2P51636 162 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 SSBP1Q04837 148 aaKnown RBP18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 TEX30Q5JUR7 227 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 ACER2Q5QJU3 275 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 C16orf47Q6ZP98 133 aaPredicted RBP18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 OR6S1Q8NH40 331 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 SLCO5A1Q9H2Y9 848 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 TMEM100Q9NV29 134 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 PLRG1O43660 514 aaKnown RBP18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 BCKDHBP21953 392 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 RPL27P61353 136 aaKnown RBP18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 ARFRP1Q13795 201 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 TTLL10Q6ZVT0 673 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 ASB13Q8WXK3 278 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 IGFBP3P17936 291 aaPredicted RBP18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 SLC26A10Q8NG04 563 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 OR52N5Q8NH56 324 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 TSLPQ969D9 159 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 TMEM230Q96A57 120 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 KIRREL1Q96J84 757 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 SMCO4Q9NRQ5 59 aa18.26■□□□□ 0.51
MAP1LC3B-206ENST00000564844 FAM186AA6NE01 2351 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 KLF8O95600 359 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 OR1D4P47884 311 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 NFATC4Q14934 902 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 ARMC6Q6NXE6 501 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 CD300LFQ8TDQ1 290 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 SLC25A43Q8WUT9 341 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 WDR77Q9BQA1 342 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 RAB33BQ9H082 229 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 PDE7BQ9NP56 450 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 LSM5Q9Y4Y9 91 aaKnown RBP18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 S100A12P80511 92 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 RSPO4Q2I0M5 234 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 C10orf91Q5T1B1 145 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 SHISA6Q6ZSJ9 500 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 EIF5A2Q9GZV4 153 aaKnown RBP18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 CLDN16Q9Y5I7 305 aa18.25■□□□□ 0.51
MAP1LC3B-206ENST00000564844 FREM2Q5SZK8 3169 aa18.24■□□□□ 0.51
MAP1LC3B-206ENST00000564844 LDLRAD4O15165 306 aa18.24■□□□□ 0.51
MAP1LC3B-206ENST00000564844 TXNDC12O95881 172 aa18.24■□□□□ 0.51
MAP1LC3B-206ENST00000564844 H2BFMP0C1H6 154 aa18.24■□□□□ 0.51
MAP1LC3B-206ENST00000564844 ANOS1P23352 680 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms