RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 MBD3L4A6NDZ8 208 aaPredicted RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 MBD3L3A6NE82 208 aaPredicted RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 CCDC182A6NF36 153 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 TRIM64A6NGJ6 449 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 MBD3L5A6NJ08 208 aaPredicted RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 METTL15A6NJ78 407 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 TRIM64CA6NLI5 447 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 HSPB2A8KAH6 182 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 RPL36A-HNRNPH2H7BZ11 118 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 J3QLW9 94 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 J3QRE1 110 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 DCTN6O00399 190 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ZNHIT1O43257 154 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 SELENOFO60613 162 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ZNF254O75437 659 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 UPK3AO75631 287 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 WISP2O76076 250 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 APOC1P02654 83 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 MT-ND5P03915 603 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 KRT8P05787 483 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 SPARCP09486 303 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 H2BFMP0C1H6 154 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 HSMCR30P0CW71 290 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 OR8G3PP0DMU2 310 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ZNF19P17023 458 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 MSR1P21757 451 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 PAX7P23759 505 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 CEACAM8P31997 349 aaPredicted RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 NAA10P41227 235 aaPredicted RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 OR3A2P47893 321 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ETV1P50549 477 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ZNF133P52736 654 aaPredicted RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 HCCSP53701 268 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 SH3BGRP55822 239 aaPredicted RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 WNT4P56705 351 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 TAS2R43P59537 309 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 PCBD1P61457 104 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 RPS16P62249 146 aaKnown RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 SIRPAP78324 504 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ROR2Q01974 943 aaKnown RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 FMODQ06828 376 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 PMPCAQ10713 525 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 MRPL28Q13084 256 aaKnown RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 RAB32Q13637 225 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 BLMHQ13867 455 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 EIF2B1Q14232 305 aaKnown RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 SPHARQ15513 63 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 HSPB2Q16082 182 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 CEACAM16Q2WEN9 425 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 LINC01590Q5TEZ4 76 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 TSPO2Q5TGU0 170 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 UBE2UQ5VVX9 321 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 TMEM53Q6P2H8 277 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 DEGS2Q6QHC5 323 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 KLHL24Q6TFL4 600 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 PLXDC2Q6UX71 529 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ZNF367Q7RTV3 350 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 SLC16A14Q7RTX9 510 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 DPY19L4Q7Z388 723 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 NUFIP2Q7Z417 695 aaKnown RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 FAM220AQ7Z4H9 259 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 GPR141Q7Z602 305 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 KRT77Q7Z794 578 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 DPPA2Q7Z7J5 298 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 CDC20BQ86Y33 519 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 TIGD4Q8IY51 512 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 CCDC36Q8IYA8 594 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 TMEM123Q8N131 208 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 LRRC18Q8N456 261 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 YIPF7Q8N8F6 280 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 SLC26A10Q8NG04 563 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 OR52N1Q8NH53 320 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 OTOSQ8NHW6 89 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 MBD3L2Q8NHZ7 208 aaPredicted RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 ZNRF4Q8WWF5 429 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 C11orf40Q8WZ69 217 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 RND1Q92730 232 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 RITA1Q96K30 269 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 FOXN4Q96NZ1 517 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 TBX5Q99593 518 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 SLX1AQ9BQ83 275 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 TTYH2Q9BSA4 534 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 SFXN3Q9BWM7 321 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 HDHD5Q9BXW7 423 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 MROQ9BYG7 248 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 PIGMQ9H3S5 423 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 C1orf198Q9H425 327 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 RNF121Q9H920 327 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 SP140LQ9H930 580 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 MARCH7Q9H992 704 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ADGRL4Q9HBW9 690 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ISYNA1Q9NPH2 558 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 ACOT13Q9NPJ3 140 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 POLE4Q9NR33 117 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 SLC7A10Q9NS82 523 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 PAK1IP1Q9NWT1 392 aaPredicted RBP4.03□□□□□ -1.76
CDR2-203ENST00000563573 BABAM2Q9NXR7 383 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 COQ3Q9NZJ6 369 aa4.03□□□□□ -1.76
CDR2-203ENST00000563573 CLCF1Q9UBD9 225 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms