RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CD200P41217 278 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 RGS6P49758 472 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 FXYD6P3P58550 94 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 CSNK2BP67870 215 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 ZNF92Q03936 586 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 CYLC2Q14093 348 aaPredicted RBP9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 ZNF181Q2M3W8 571 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 SAMD5Q5TGI4 173 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 CD276Q5ZPR3 534 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 LYPD4Q6UWN0 246 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 MBOAT2Q6ZWT7 520 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 PGAP1Q75T13 922 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 MRPL21Q7Z2W9 205 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 CROCCP2Q86T23 111 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 LDLRAD3Q86YD5 345 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 OFCC1Q8IZS5 231 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 PNLDC1Q8NA58 520 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 LZICQ8WZA0 190 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 H1FXQ92522 213 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 COG8Q96MW5 612 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 POLR2J2Q9GZM3 115 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 POLR2J3Q9H1A7 115 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 FN3KRPQ9HA64 309 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 ZNRD1Q9P1U0 126 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 ZNF281Q9Y2X9 895 aa9.6□□□□□ -0.87
NSMCE1-202ENST00000561960 LOC100653049A0A140TA62 436 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 MEIOCA2RUB1 952 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 RNASEK-C17orf49H0YIS7 233 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 KRT34O76011 436 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 HLA-DQA2P01906 255 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 IFNW1P05000 195 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 VSIG10L2P0DP72 767 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 NCK1P16333 377 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 TUBG1P23258 451 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 SDHAP31040 664 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 GATA4P43694 442 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 LSM6P62312 80 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 SELENOWP63302 87 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 TRAP1Q12931 704 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 FGD3Q5JSP0 725 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 GLYATL3Q5SZD4 288 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 SLC18B1Q6NT16 456 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 C11orf87Q6NUJ2 197 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 GDPGP1Q6ZNW5 385 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 LINC00471Q8N535 108 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 GCSAMQ8N6F7 178 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 KLHDC1Q8N7A1 406 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 Q8TCH9 128 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 ACOT11Q8WXI4 607 aaPredicted RBP9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 RSRC1Q96IZ7 334 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 HSH2DQ96JZ2 352 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 COQ7Q99807 217 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 HDHD2Q9H0R4 259 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 DPAGT1Q9H3H5 408 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 NMNAT1Q9HAN9 279 aaPredicted RBP9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 ELL3Q9HB65 397 aaPredicted RBP9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 RPRD1BQ9NQG5 326 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 TUBG2Q9NRH3 451 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 SNTG1Q9NSN8 517 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 RPUSD1Q9UJJ7 312 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 VPREB3Q9UKI3 123 aa9.59□□□□□ -0.87
NSMCE1-202ENST00000561960 IGLV1-36A0A0B4J1U3 117 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 BTBD17A6NE02 478 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 GGT3PA6NGU5 568 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 TVP23AA6NH52 213 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 CD300LBA8K4G0 201 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 FAM220BPB1ANY3 271 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 H3BUX3 64 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 ACOT8O14734 319 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 NDUFB2O95178 105 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 GABRA5P31644 462 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 GGT2P36268 569 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 MDH1P40925 334 aaKnown RBP9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 NPY4RP50391 375 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 HIST1H3AP68431 136 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 MALLQ13021 153 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 HABP2Q14520 560 aaPredicted RBP9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 SEC23BQ15437 767 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 PCK2Q16822 640 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 PLA1AQ53H76 456 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 WDR38Q5JTN6 314 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 HIST2H3PS2Q5TEC6 136 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 HIST2H3AQ71DI3 136 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 FKBP9P1Q75LS8 142 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 TSEN54Q7Z6J9 526 aaKnown RBP9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 WDR86Q86TI4 376 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 OR6V1Q8N148 313 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 SDR9C7Q8NEX9 313 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 GJC3Q8NFK1 279 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 OR2T12Q8NG77 320 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 OR4K13Q8NH42 304 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 OR52J3Q8NH60 311 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 LRRC29Q8WV35 223 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 SGCDQ92629 289 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 ERMAPQ96PL5 475 aaPredicted RBP9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 NMNAT3Q96T66 252 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 NKX3-1Q99801 234 aaPredicted RBP9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 ATF6BQ99941 703 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 C16orf95Q9H693 158 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 CNTD2Q9H8S5 307 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms