RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 L7N2F9 121 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 HOXC4P09017 264 aaPredicted RBP3.91□□□□□ -1.78
SMG1-204ENST00000561940 STAG3L3P0CL85 134 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 CT45A6P0DMU7 189 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 CT45A5P0DMU8 189 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 CT45A7P0DMV0 189 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 CTRB1P17538 263 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 F2RP25116 425 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 PPOXP50336 477 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 GINS1Q14691 196 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 DEFB116Q30KQ4 102 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 CT45A1Q5HYN5 189 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 ARL9Q6T311 187 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 USP50Q70EL3 339 aaPredicted RBP3.91□□□□□ -1.78
SMG1-204ENST00000561940 CT45A3Q8NHU0 189 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 LRRC29Q8WV35 223 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 PEX13Q92968 403 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 PRO3102Q9H379 93 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 TMEM38AQ9H6F2 299 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 NTN4Q9HB63 628 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 ISYNA1Q9NPH2 558 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 CASP8AP2Q9UKL3 1982 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 DOCK8Q8NF50 2099 aa3.9□□□□□ -1.78
SMG1-204ENST00000561940 SMG6Q86US8 1419 aaKnown RBP3.9□□□□□ -1.78
SMG1-204ENST00000561940 RGPD8O14715 1765 aaPredicted RBP3.9□□□□□ -1.79
SMG1-204ENST00000561940 GOLGA6L7A0A1B0GV03 622 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 A0A1B0GVX0 72 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 H0YIV9 168 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 RAD51CO43502 376 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 RDH16O75452 317 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 BCHEP06276 602 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 CSNK2A2P19784 350 aaPredicted RBP3.9□□□□□ -1.79
SMG1-204ENST00000561940 RAB3BP20337 219 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 NBL1P41271 181 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 CSNK1A1P48729 337 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 ERCC8Q13216 396 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 EIF4EBP2Q13542 120 aaPredicted RBP3.9□□□□□ -1.79
SMG1-204ENST00000561940 PGGHGQ32M88 737 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 TMCO2Q7Z6W1 182 aaPredicted RBP3.9□□□□□ -1.79
SMG1-204ENST00000561940 LINC01551Q86U37 167 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 DEFB123Q8N688 67 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 C15orf56Q8N910 161 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 OR2A5Q96R48 311 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 SLC17A9Q9BYT1 436 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 ZDHHC4Q9NPG8 344 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 LHX9Q9NQ69 397 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 MRPL22Q9NWU5 206 aaKnown RBP3.9□□□□□ -1.79
SMG1-204ENST00000561940 PIEZO1Q92508 2521 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 ASTN1O14525 1302 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 GAKO14976 1311 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 MAP3K19Q56UN5 1328 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 KNDC1Q76NI1 1749 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 PKD1L3Q7Z443 1732 aa3.9□□□□□ -1.79
SMG1-204ENST00000561940 AKAP12Q02952 1782 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 IGLV4-69A0A075B6H9 119 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 IGLV3-16A0A075B6K0 115 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 M0R3G1 203 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 SNAI2O43623 268 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 ENTPD5O75356 428 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 FCN3O75636 299 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 UBCP0CG48 685 aaKnown RBP3.89□□□□□ -1.79
SMG1-204ENST00000561940 MAGP20916 626 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 UBE2UQ5VVX9 321 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 SPESP1Q6UW49 350 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 CYB561D1Q8N8Q1 229 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 APH1BQ8WW43 257 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 ZNF681Q96N22 645 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 ZNF317Q96PQ6 595 aaPredicted RBP3.89□□□□□ -1.79
SMG1-204ENST00000561940 SDHCQ99643 169 aaPredicted RBP3.89□□□□□ -1.79
SMG1-204ENST00000561940 ANKRD60Q9BZ19 345 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 MYEF2Q9P2K5 600 aaKnown RBP3.89□□□□□ -1.79
SMG1-204ENST00000561940 ZNF222Q9UK12 451 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 KLK12Q9UKR0 248 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 PSME2Q9UL46 239 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 SLIT3O75094 1523 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 TTC21AQ8NDW8 1320 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 CARMIL3Q8ND23 1372 aa3.89□□□□□ -1.79
SMG1-204ENST00000561940 KIF13BQ9NQT8 1826 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 H7C1H1 209 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 H7C417 338 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 AQP8O94778 261 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 OXTP01178 125 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 PRB2P02812 416 aaPredicted RBP3.88□□□□□ -1.79
SMG1-204ENST00000561940 IFNW1P05000 195 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 CLTAP09496 248 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 U2AF2P26368 475 aaKnown RBP eCLIP3.88□□□□□ -1.793e-12■■■■□ 20.6
SMG1-204ENST00000561940 HERVK_113P61574 105 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 RPS15AP62244 130 aaKnown RBP3.88□□□□□ -1.79
SMG1-204ENST00000561940 RAP1AP62834 184 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 PTGES3Q15185 160 aaKnown RBP3.88□□□□□ -1.79
SMG1-204ENST00000561940 METTL21CQ5VZV1 264 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 Q6ZR03 302 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 NOXO1Q8NFA2 376 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 OR10G2Q8NGC3 310 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 OR52E2Q8NGJ4 325 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 OR51E1Q8TCB6 317 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 TMEM230Q96A57 120 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 ZYG11BQ9C0D3 744 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 SPNS1Q9H2V7 528 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 SAV1Q9H4B6 383 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms