RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ZNF350Q9GZX5 532 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 SLC25A19Q9HC21 320 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 RANGRFQ9HD47 186 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 ISYNA1Q9NPH2 558 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 INPP5EQ9NRR6 644 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 FKBP14Q9NWM8 211 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 VNN3Q9NY84 501 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 IL20Q9NYY1 176 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ERVK-18Q9QC07 812 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 CRNNQ9UBG3 495 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 PRODH2Q9UF12 536 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 SLC6A5Q9Y345 797 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 RNF115Q9Y4L5 304 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 MMACHCQ9Y4U1 282 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 PLXNB1O43157 2135 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 FREM3P0C091 2139 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 SNRNP200O75643 2136 aaKnown RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 DOCK7Q96N67 2140 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 IGHV4-28A0A0C4DH34 117 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 A0A0G2JN53 185 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 TRBV4-1A0A0J9YWV2 114 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 TRBV11-1A0A0K0K1C0 115 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 A0A1W2PPW3 197 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 FAM90A10PA6NDY2 464 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 EFCAB9A8MZ26 197 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 F5H0A9 414 aaPredicted RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 WWP2O00308 870 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 CCRL2O00421 344 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 FFAR1O14842 300 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 HSPA12AO43301 675 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 IDH3BO43837 385 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 XPNPEP2O43895 674 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 DOK2O60496 412 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 PAGE4O60829 102 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 MITFO75030 526 aaPredicted RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 TNFSF13O75888 250 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 OR2J2O76002 312 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 DIRAS1O95057 198 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SNX4O95219 450 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 NSA2O95478 260 aaKnown RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 NTN1O95631 604 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 RAB36O95755 333 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 CH25HO95992 272 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 IGF2P01344 180 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 IFNGP01579 166 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 OPN1SWP03999 348 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 P04436 131 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 HTR1AP08908 422 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 PNMTP11086 282 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ACP2P11117 423 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 CD36P16671 472 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ZNF182P17025 639 aaPredicted RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 GABRB1P18505 474 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 TNNI3P19429 210 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 DRD5P21918 477 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 PAICSP22234 425 aaKnown RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 CHATP28329 748 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 CD40LGP29965 261 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 FMO3P31513 532 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 GABRA3P34903 492 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ATP6V1E1P36543 226 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SLC15A1P46059 708 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 YAP1P46937 504 aaKnown RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 GSSP48637 474 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 AMTP48728 403 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 RGS6P49758 472 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 PDLIM4P50479 330 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 CDK5Q00535 292 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ZNF45Q02386 682 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SRYQ05066 204 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 GPR50Q13585 617 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 IRF3Q14653 427 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 GINS1Q14691 196 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 TOMM20Q15388 145 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SPHARQ15513 63 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 TRAM1Q15629 374 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 MAPK11Q15759 364 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SNAPC1Q16533 368 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 SYPL1Q16563 259 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 CTF1Q16619 201 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ZNF672Q499Z4 452 aaPredicted RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 ZNF628Q5EBL2 1059 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ARMCX4Q5H9R4 360 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 KPRPQ5T749 579 aaPredicted RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 AGAP6Q5VW22 663 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 C12orf73Q69YU5 71 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 LAIR2Q6ISS4 152 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 FAHD2BQ6P2I3 314 aaPredicted RBP2.74□□□□□ -1.97
SPG11-225ENST00000561391 ULK3Q6PHR2 472 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 TMPRSS11AQ6ZMR5 421 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 RTL4Q6ZR62 310 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 TMPRSS11FQ6ZWK6 438 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 AHSA2Q719I0 299 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 LINGO2Q7L985 606 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 NUP54Q7Z3B4 507 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ZER1Q7Z7L7 766 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 GALNT10Q86SR1 603 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 ADCK1Q86TW2 530 aa2.74□□□□□ -1.97
SPG11-225ENST00000561391 GID4Q8IVV7 300 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms