RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ANKRD46Q86W74 232 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 C10orf111Q8N326 155 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 FGFRL1Q8N441 504 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 CLDN22Q8N7P3 220 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 LY6G5BQ8NDX9 201 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 OR52H1Q8NGJ2 320 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 OR5J2Q8NH18 312 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 IL17DQ8TAD2 202 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 PIFOQ8TCI5 191 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 FBXO25Q8TCJ0 367 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 AENQ8WTP8 325 aaKnown RBP4.23□□□□□ -1.73
HERC1-213ENST00000561359 ERGIC1Q969X5 290 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 CCDC115Q96NT0 180 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 MOGAT1Q96PD6 335 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 ZNF347Q96SE7 839 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 ECSITQ9BQ95 431 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 C1orf50Q9BV19 199 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 METTL8Q9H825 291 aaKnown RBP4.23□□□□□ -1.73
HERC1-213ENST00000561359 ABCB10Q9NRK6 738 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 TMEM100Q9NV29 134 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 SELENONQ9NZV5 590 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 TMEM216Q9P0N5 145 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 RNF7Q9UBF6 113 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 GIMAP2Q9UG22 337 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 KCNG2Q9UJ96 466 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 RAB21Q9UL25 225 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 TCF19Q9Y242 345 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 ZNF443Q9Y2A4 671 aaPredicted RBP4.23□□□□□ -1.73
HERC1-213ENST00000561359 TIMM10BQ9Y5J6 103 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 SORL1Q92673 2214 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 KMT2AQ03164 3969 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 HERC1Q15751 4861 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 A0A1B0GWA3 101 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 UBE2QL1A1L167 161 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 MCIDASD6RGH6 385 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 LRRN3E7EW58 273 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 AZIN1O14977 448 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 PEX11AO75192 247 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 E2F6O75461 281 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 SERPINE1P05121 402 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 FPR3P25089 353 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 ECHS1P30084 290 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 MYCNOSP40205 109 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 GUCA1AP43080 201 aaPredicted RBP4.22□□□□□ -1.73
HERC1-213ENST00000561359 SERPINB9P50453 376 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 PLTPP55058 493 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 LGALS4P56470 323 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 PCBD1P61457 104 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 BLMHQ13867 455 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 MPPED2Q15777 294 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 PDCD4Q53EL6 469 aaKnown RBP4.22□□□□□ -1.73
HERC1-213ENST00000561359 RABL3Q5HYI8 236 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 ALG10BQ5I7T1 473 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 RNF220Q5VTB9 566 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 PRAMEF6Q5VXH4 476 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 C10orf99Q6UWK7 81 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 CCDC80Q76M96 950 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 FAM90A1Q86YD7 464 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 LRRC34Q8IZ02 419 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 OR6S1Q8NH40 331 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 RPS4Y2Q8TD47 263 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 DNAJA4Q8WW22 397 aaPredicted RBP4.22□□□□□ -1.73
HERC1-213ENST00000561359 H1FXQ92522 213 aaKnown RBP4.22□□□□□ -1.73
HERC1-213ENST00000561359 SPDL1Q96EA4 605 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 RSRC1Q96IZ7 334 aaKnown RBP4.22□□□□□ -1.73
HERC1-213ENST00000561359 PPP3R2Q96LZ3 170 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 COG8Q96MW5 612 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 CPPED1Q9BRF8 314 aaPredicted RBP4.22□□□□□ -1.73
HERC1-213ENST00000561359 TM2D3Q9BRN9 247 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 SLC35A5Q9BS91 424 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 TUBB1Q9H4B7 451 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 C12orf10Q9HB07 376 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 KCNK9Q9NPC2 374 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 PTTG3PQ9NZH4 202 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 PITPNC1Q9UKF7 332 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 SNX12Q9UMY4 172 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 GMEB1Q9Y692 573 aa4.22□□□□□ -1.73
HERC1-213ENST00000561359 IGHV3OR15-7A0A075B7D8 119 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 A0A1W2PQ09 198 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 hCG_1807616A0A1W2PRN6 198 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 A6NDX4 124 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 NKX6-3A6NJ46 265 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 SEC14L6B5MCN3 397 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 H0YAE9 185 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 M0R1W7 72 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 LDLRAD4O15165 306 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 NDUFB3O43676 98 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 GLCEO94923 617 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 SLC2A10O95528 541 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 DUX4L4P0CJ87 422 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 MYL2P10916 166 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 POU1F1P28069 291 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 LAP3P28838 519 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 PHBP35232 272 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 GSK3BP49841 420 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 NAA20P61599 178 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 RPL23AP62750 156 aaKnown RBP4.21□□□□□ -1.74
HERC1-213ENST00000561359 MAB21L1Q13394 359 aa4.21□□□□□ -1.74
HERC1-213ENST00000561359 DYNC1I2Q13409 638 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms