RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 FAM206AQ9NX38 181 aa4.73□□□□□ -1.65
ZEB1-220ENST00000560909 CHCHD3Q9NX63 227 aaKnown RBP4.73□□□□□ -1.65
ZEB1-220ENST00000560909 NPAP1Q9NZP6 1156 aa4.73□□□□□ -1.65
ZEB1-220ENST00000560909 NUFIP1Q9UHK0 495 aaKnown RBP4.73□□□□□ -1.65
ZEB1-220ENST00000560909 ST6GALNAC2Q9UJ37 374 aa4.73□□□□□ -1.65
ZEB1-220ENST00000560909 LRP12Q9Y561 859 aa4.73□□□□□ -1.65
ZEB1-220ENST00000560909 SIRT4Q9Y6E7 314 aaPredicted RBP4.73□□□□□ -1.65
ZEB1-220ENST00000560909 R4GMQ9 66 aa4.73□□□□□ -1.65
ZEB1-220ENST00000560909 GCN1Q92616 2671 aaKnown RBP4.73□□□□□ -1.65
ZEB1-220ENST00000560909 CENPEQ02224 2701 aa4.73□□□□□ -1.65
ZEB1-220ENST00000560909 DCHS2Q6V1P9 2916 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 IGHV2OR16-5A0A0B4J2B6 119 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 IGHV1-18A0A0C4DH31 117 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 A0A0U1RQV5 110 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 A0A1B0GTI1 187 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 LOC390937A0A1W2PQ73 354 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 NKX2-6A6NCS4 301 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 DPRXA6NFQ7 191 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 FAM90A27PA6NNH2 459 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 MAGEB4O15481 346 aaPredicted RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 PLPP2O43688 288 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 DOK2O60496 412 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 GOSR1O95249 250 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 PNPP00491 289 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 ISG15P05161 165 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 KRT8P05787 483 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 LCKP06239 509 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 RPSAP08865 295 aaKnown RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 CECR9P0C854 216 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 CPEP16870 476 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 CCL1P22362 96 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 GALP22466 123 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 ANOS1P23352 680 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 EEF1B2P24534 225 aaKnown RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 PTAFRP25105 342 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 CD40P25942 277 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 STOMP27105 288 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 APEX1P27695 318 aaKnown RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 WNT5AP41221 380 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 MAP2K4P45985 399 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 RGS6P49758 472 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 RIDAP52758 137 aaKnown RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 GBX2P52951 348 aaPredicted RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 NR1H2P55055 460 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 TAS2R43P59537 309 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 NANOS3P60323 173 aaKnown RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 RPS11P62280 158 aaKnown RBP eCLIP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 TUBA1BP68363 451 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 NKX6-1P78426 367 aaPredicted RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 HGFACQ04756 655 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 RAB39AQ14964 217 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 CDK5R1Q15078 307 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 PPA1Q15181 289 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 TP53I3Q53FA7 332 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 KRTAP5-11Q6L8G4 156 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 CD200R1LQ6Q8B3 271 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 LRRN1Q6UXK5 716 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 KCTD8Q6ZWB6 473 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 TUBA1AQ71U36 451 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 KRT77Q7Z794 578 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 MYPOPQ86VE0 399 aaPredicted RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 ELMOD2Q8IZ81 293 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 PRSS35Q8N3Z0 413 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 PAQR4Q8N4S7 273 aaPredicted RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 SLC30A7Q8NEW0 376 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 OR52H1Q8NGJ2 320 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 OR1J2Q8NGS2 313 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 OR2G2Q8NGZ5 317 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 AKR7LQ8NHP1 331 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 FAM222BQ8WU58 562 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 SNX33Q8WV41 574 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 SPRYD4Q8WW59 207 aaPredicted RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 GATAD2BQ8WXI9 593 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 SPTSSAQ969W0 71 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 C4orf36Q96KX1 117 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 PGLYRP3Q96LB9 341 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 C4orf45Q96LM5 186 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 OPALINQ96PE5 141 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 TBX5Q99593 518 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 MGLLQ99685 303 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 MRPS26Q9BYN8 205 aaKnown RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 MOB1AQ9H8S9 216 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 ACOXLQ9NUZ1 547 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 PLEK2Q9NYT0 353 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 ZNF319Q9P2F9 582 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 NDRG3Q9UGV2 375 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 POLR1DQ9Y2S0 133 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 SF3B6Q9Y3B4 125 aaKnown RBP4.72□□□□□ -1.65
ZEB1-220ENST00000560909 SNX5Q9Y5X3 404 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 SPG11Q96JI7 2443 aa4.72□□□□□ -1.65
ZEB1-220ENST00000560909 ICE1Q9Y2F5 2266 aa4.71□□□□□ -1.65
ZEB1-220ENST00000560909 NBPF19A0A087WUL8 3843 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 TRBV5-5A0A0J9YX44 114 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 IQCMA0A1B0GVH7 501 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 TMEM269A0A1B0GVZ9 245 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 A0A1B0GWJ7 208 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 DHRS7CA6NNS2 312 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 DEFB108AA8MXU0 73 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 H3BSA7 217 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 C19orf84I3L1E1 186 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms