RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 DBHP09172 617 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 CBR1P16152 277 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 FSTP19883 344 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 RAB3BP20337 219 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 BMP5P22003 454 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 APEX1P27695 318 aaKnown RBP7.49□□□□□ -1.21
TRAF3-209ENST00000560463 MXD1Q05195 221 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 MRPL49Q13405 166 aaKnown RBP7.49□□□□□ -1.21
TRAF3-209ENST00000560463 LSAMPQ13449 338 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 INSL4Q14641 139 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 C3orf36Q3SXR2 165 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 TIMM23BQ5SRD1 257 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 STAC2Q6ZMT1 411 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 MDP1Q86V88 176 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 SERPINA12Q8IW75 414 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 RDH10Q8IZV5 341 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 PARP16Q8N5Y8 322 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 STEAP2Q8NFT2 490 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 OR51A4Q8NGJ6 313 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 OR13C3Q8NGS6 347 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 MCFD2Q8NI22 146 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 OR51E1Q8TCB6 317 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 SLC7A6Q92536 515 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 AP3S1Q92572 193 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 APOBEC3DQ96AK3 386 aaPredicted RBP7.49□□□□□ -1.21
TRAF3-209ENST00000560463 C10orf35Q96D05 121 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 POM121L2Q96KW2 1035 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 C1QTNF5Q9BXJ0 243 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 PPIL3Q9H2H8 161 aaKnown RBP7.49□□□□□ -1.21
TRAF3-209ENST00000560463 TPK1Q9H3S4 243 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 ZCCHC4Q9H5U6 513 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 TCF7L1Q9HCS4 588 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 GPR84Q9NQS5 396 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 ZNF275Q9NSD4 429 aaPredicted RBP7.49□□□□□ -1.21
TRAF3-209ENST00000560463 JKAMPQ9P055 326 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 CRNNQ9UBG3 495 aaPredicted RBP7.49□□□□□ -1.21
TRAF3-209ENST00000560463 CKLFQ9UBR5 152 aa7.49□□□□□ -1.21
TRAF3-209ENST00000560463 SPTBN1Q01082 2364 aaKnown RBP7.49□□□□□ -1.21
TRAF3-209ENST00000560463 LOC100509620A0A075B734 347 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 A0A1B0GTI1 187 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 C5orf49A4QMS7 147 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 MEGF11A6BM72 1044 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 ATXN7O15265 892 aaPredicted RBP7.48□□□□□ -1.21
TRAF3-209ENST00000560463 PIN1P1O15428 100 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 TBX1O43435 398 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 ICMTO60725 284 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 IGKV3-15P01624 115 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 SLC2A1P11166 492 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 ZNF14P17017 642 aaPredicted RBP7.48□□□□□ -1.21
TRAF3-209ENST00000560463 IL32P24001 234 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 RANBP1P43487 201 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 SOX2P48431 317 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 DYNC1I2Q13409 638 aaKnown RBP7.48□□□□□ -1.21
TRAF3-209ENST00000560463 ST3GAL2Q16842 350 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 TBC1D28Q2M2D7 210 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 FAM27D1Q5T7N8 215 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 MTFR2Q6P444 385 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 ZNF474Q6S9Z5 364 aaPredicted RBP7.48□□□□□ -1.21
TRAF3-209ENST00000560463 UNQ6126/PRO20091Q6UXV3 157 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 COLCA1Q6ZS62 124 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 PGAP1Q75T13 922 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 NAA40Q86UY6 237 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 COMMD2Q86X83 199 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 ZNF584Q8IVC4 421 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 C1orf174Q8IYL3 243 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 WDR31Q8NA23 367 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 SLC30A7Q8NEW0 376 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 OR5L1Q8NGL2 311 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 OR5D14Q8NGL3 314 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 OR10AC1Q8NH08 325 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 ACOT12Q8WYK0 555 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 AKAP1Q92667 903 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRAF3-209ENST00000560463 KCTD12Q96CX2 325 aaKnown RBP7.48□□□□□ -1.21
TRAF3-209ENST00000560463 CNTNAP3BQ96NU0 1288 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 MRI1Q9BV20 369 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 CNTNAP3Q9BZ76 1288 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 OPA3Q9H6K4 179 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 NOX3Q9HBY0 568 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 TBCCD1Q9NVR7 557 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 ZNF319Q9P2F9 582 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 SH3BGRL2Q9UJC5 107 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 N6AMT1Q9Y5N5 214 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 PEX16Q9Y5Y5 336 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 PMF1-BGLAPU3KQ54 211 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 V9GYS6 101 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 ICE1Q9Y2F5 2266 aa7.48□□□□□ -1.21
TRAF3-209ENST00000560463 A0A1B0GUH1 482 aa7.47□□□□□ -1.21
TRAF3-209ENST00000560463 A0A1W2PPK0 400 aa7.47□□□□□ -1.21
TRAF3-209ENST00000560463 SHISA3A0PJX4 238 aa7.47□□□□□ -1.21
TRAF3-209ENST00000560463 NOTOA8MTQ0 251 aa7.47□□□□□ -1.21
TRAF3-209ENST00000560463 EEF1E1-BLOC1S5C9J1V9 151 aa7.47□□□□□ -1.21
TRAF3-209ENST00000560463 CCL21O00585 134 aa7.47□□□□□ -1.21
TRAF3-209ENST00000560463 EEF1E1O43324 174 aaKnown RBP7.47□□□□□ -1.21
TRAF3-209ENST00000560463 DHRS3O75911 302 aa7.47□□□□□ -1.21
TRAF3-209ENST00000560463 ALX3O95076 343 aa7.47□□□□□ -1.21
TRAF3-209ENST00000560463 ERCC1P07992 297 aaPredicted RBP7.47□□□□□ -1.21
TRAF3-209ENST00000560463 CLEC2LP0C7M8 214 aa7.47□□□□□ -1.21
TRAF3-209ENST00000560463 ZNF20P17024 532 aa7.47□□□□□ -1.21
TRAF3-209ENST00000560463 IGFBP3P17936 291 aaPredicted RBP7.47□□□□□ -1.21
TRAF3-209ENST00000560463 TUBG1P23258 451 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms