RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LINC00346Q8IVM7 164 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 ZNF101Q8IZC7 436 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 NANOGP1Q8N7R0 232 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 ABHD4Q8TB40 342 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 ST7LQ8TDW4 575 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 SLAMF6Q96DU3 332 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 MARS2Q96GW9 593 aaKnown RBP12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 MAP6Q96JE9 813 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 OR5M11Q96RB7 305 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 C1QTNF5Q9BXJ0 243 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 OPA3Q9H6K4 179 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 NIPAL2Q9H841 368 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 MED20Q9H944 212 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 CLEC2DQ9UHP7 191 aa12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.02□□□□□ -0.49
PKNOX1-209ENST00000560448 M0R135 149 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 IGHV3-13P01766 116 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 CD36P16671 472 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 EFNA4P52798 201 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 DSCR9P59020 149 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 EIF2B1Q14232 305 aaKnown RBP12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 SPCS2Q15005 226 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 KCTD18Q6PI47 426 aaPredicted RBP12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 BBS1Q8NFJ9 593 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 SNX33Q8WV41 574 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 RNF133Q8WVZ7 376 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 NEU4Q8WWR8 484 aaPredicted RBP12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 ASB17Q8WXJ9 295 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 ITFG2Q969R8 447 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 ZMYND19Q96E35 227 aaPredicted RBP12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 RNFT2Q96EX2 444 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 PERPQ96FX8 193 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 ZNF799Q96GE5 643 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 CNN2Q99439 309 aaKnown RBP12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 KCNJ15Q99712 375 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 MRPL37Q9BZE1 423 aaKnown RBP12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 DYNLRB1Q9NP97 96 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 ITGB1BP2Q9UKP3 347 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 EXOGQ9Y2C4 368 aaKnown RBP12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 GRIP1Q9Y3R0 1128 aa12.01□□□□□ -0.49
PKNOX1-209ENST00000560448 POLQO75417 2590 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 TMEM129A0AVI4 362 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 ACSM4P0C7M7 580 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 RAC2P15153 192 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 HTR1FP30939 366 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 CDKN1AP38936 164 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 MTNR1AP48039 350 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 MALLQ13021 153 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 TAF13Q15543 124 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 PCGF3Q3KNV8 242 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 ARMCX4Q5H9R4 360 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 LYPD4Q6UWN0 246 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 FBXW12Q6X9E4 464 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 RFPL4BQ6ZWI9 263 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 LURAP1LQ8IV03 231 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 KLF14Q8TD94 323 aaPredicted RBP12□□□□□ -0.49
PKNOX1-209ENST00000560448 DIRC2Q96SL1 478 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 DCUN1D5Q9BTE7 237 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 ABHD6Q9BV23 337 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 DUSP13Q9UII6 198 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 LAMP5Q9UJQ1 280 aa12□□□□□ -0.49
PKNOX1-209ENST00000560448 PRRC2AP48634 2157 aaKnown RBP11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 PLSCR5A0PG75 271 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 CCDC182A6NF36 153 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 F5H5K5 113 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 ZNF254O75437 659 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 F12P00748 615 aaPredicted RBP11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 SELEP16581 610 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 ALOX5APP20292 161 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 HSD11B1P28845 292 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 DCTDP32321 178 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 ETV1P50549 477 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 NKPD1Q17RQ9 610 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 Q5PR19 223 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 OR52H1Q8NGJ2 320 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 OR10S1Q8NGN2 331 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 SLC25A40Q8TBP6 338 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 OPALINQ96PE5 141 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 MGLLQ99685 303 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 MND1Q9BWT6 205 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 JAM3Q9BX67 310 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 OR2J1Q9GZK6 312 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 NKIRAS2Q9NYR9 191 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 ERGIC3Q9Y282 383 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 LRBAP50851 2863 aa11.99□□□□□ -0.49
PKNOX1-209ENST00000560448 ARFGEF3Q5TH69 2177 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 ARID1AO14497 2285 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 CREBBPQ92793 2442 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 J3QRE1 110 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 SLC22A1O15245 554 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 NGFP01138 241 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 IGHA1P01876 353 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 ADH4P08319 380 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 DBHP09172 617 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 ZNF182P17025 639 aaPredicted RBP11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 KITLGP21583 273 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 CFL1P23528 166 aaKnown RBP11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 GADD45AP24522 165 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 OPRL1P41146 370 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 RPS27P42677 84 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms