RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 FZR1Q9UM11 496 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 EXOGQ9Y2C4 368 aaKnown RBP11.59□□□□□ -0.55
SMAD3-214ENST00000560402 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 FAM157AC9JC47 383 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 PPIHO43447 177 aaKnown RBP11.58□□□□□ -0.56
SMAD3-214ENST00000560402 CLPXO76031 633 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 PATE4P0C8F1 98 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 FAM157BP0CG42 384 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 NAT2P11245 290 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 COL8A2P25067 703 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 APLNRP35414 380 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 TGFBR2P37173 567 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 LIPAP38571 399 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 ZNF133P52736 654 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-214ENST00000560402 KLHL12Q53G59 568 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 SLC35D3Q5M8T2 416 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 SLC35F1Q5T1Q4 408 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 C10orf128Q5T292 105 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 GPR139Q6DWJ6 353 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 UNQ6126/PRO20091Q6UXV3 157 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 C1orf174Q8IYL3 243 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 ACBD7Q8N6N7 88 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 SEMA6DQ8NFY4 1073 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 OR52N1Q8NH53 320 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 ASB10Q8WXI3 467 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 C11orf40Q8WZ69 217 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 UFD1Q92890 307 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 MCHR2Q969V1 340 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 RAB39BQ96DA2 213 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 MRPL13Q9BYD1 178 aaKnown RBP11.58□□□□□ -0.56
SMAD3-214ENST00000560402 KCNN2Q9H2S1 579 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 NARFLQ9H6Q4 476 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 METTL17Q9H7H0 456 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-214ENST00000560402 SSR3Q9UNL2 185 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 HIF3AQ9Y2N7 669 aa11.58□□□□□ -0.56
SMAD3-214ENST00000560402 LOC100506127A0A0U1RQW1 187 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 BLOC1S5-TXNDC5H3BN57 136 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 PNPP00491 289 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 IGHA1P01876 353 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 CD14P08571 375 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 ZNF182P17025 639 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-214ENST00000560402 GADD45AP24522 165 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 SOX6P35712 828 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 MAGEB1P43366 347 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 UCP2P55851 309 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 FXYD6P3P58550 94 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 HSF2Q03933 536 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 RPL18Q07020 188 aaKnown RBP11.57□□□□□ -0.56
SMAD3-214ENST00000560402 DCTN2Q13561 401 aaKnown RBP11.57□□□□□ -0.56
SMAD3-214ENST00000560402 ALG10Q5BKT4 473 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 THSD4Q6ZMP0 1018 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 BCDIN3DQ7Z5W3 292 aaKnown RBP11.57□□□□□ -0.56
SMAD3-214ENST00000560402 CROCCP3Q8IVE0 287 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 PAQR4Q8N4S7 273 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-214ENST00000560402 LRRC17Q8N6Y2 441 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 SLC37A3Q8NCC5 494 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 OR52E2Q8NGJ4 325 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 ZNF418Q8TF45 676 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-214ENST00000560402 OR5M11Q96RB7 305 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 DCSTAMPQ9H295 470 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 INIPQ9NRY2 104 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 CGGBP1Q9UFW8 167 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-214ENST00000560402 LSM2Q9Y333 95 aaKnown RBP11.57□□□□□ -0.56
SMAD3-214ENST00000560402 IER3IP1Q9Y5U9 82 aa11.57□□□□□ -0.56
SMAD3-214ENST00000560402 IGHV1-69-2A0A0G2JMI3 117 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 DAPL1A0PJW8 107 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 CLDN25C9JDP6 229 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 RENP00797 406 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 MMP7P09237 267 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-214ENST00000560402 CRYBB2P43320 205 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 TAS2R43P59537 309 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 VBP1P61758 197 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 LMO4P61968 165 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 LSM3P62310 102 aaKnown RBP11.56□□□□□ -0.56
SMAD3-214ENST00000560402 MRPS34P82930 218 aaKnown RBP11.56□□□□□ -0.56
SMAD3-214ENST00000560402 CRMP1Q14194 572 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 SPCS2Q15005 226 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 CPEB3Q8NE35 698 aaKnown RBP11.56□□□□□ -0.56
SMAD3-214ENST00000560402 OR51G2Q8NGK0 314 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 FNDC8Q8TC99 324 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 S100ZQ8WXG8 99 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 TIMD4Q96H15 378 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 OPALINQ96PE5 141 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 CNN2Q99439 309 aaKnown RBP11.56□□□□□ -0.56
SMAD3-214ENST00000560402 COQ7Q99807 217 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 CHCHD6Q9BRQ6 235 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 OR51V1Q9H2C8 321 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 OCEL1Q9H607 264 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 ZNF665Q9H7R5 613 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 SAP30LQ9HAJ7 183 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 SIAEQ9HAT2 523 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 PLGRKTQ9HBL7 147 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 LPAR2Q9HBW0 351 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 EXOSC4Q9NPD3 245 aaKnown RBP11.56□□□□□ -0.56
SMAD3-214ENST00000560402 NRIP3Q9NQ35 241 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 NDUFB11Q9NX14 153 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 HAO2Q9NYQ3 351 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 TREM2Q9NZC2 230 aa11.56□□□□□ -0.56
SMAD3-214ENST00000560402 CCDC59Q9P031 241 aaKnown RBP11.56□□□□□ -0.56
SMAD3-214ENST00000560402 GRHPRQ9UBQ7 328 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms