RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 KLBQ86Z14 1044 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 C20orf196Q8IYI0 205 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 TMEM123Q8N131 208 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 C4orf36Q96KX1 117 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 ZNF385AQ96PM9 386 aaKnown RBP17.69■□□□□ 0.42
PSEN1-225ENST00000560005 CDADC1Q9BWV3 514 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 STUB1Q9UNE7 303 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 SSR3Q9UNL2 185 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 NOSIPQ9Y314 301 aaKnown RBP17.69■□□□□ 0.42
PSEN1-225ENST00000560005 METTL15A6NJ78 407 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 GABRA5P31644 462 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 CTF1Q16619 201 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 PCK2Q16822 640 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 CARD17Q5XLA6 110 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 OR7E24Q6IFN5 339 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 RPL22L1Q6P5R6 122 aaKnown RBP17.68■□□□□ 0.42
PSEN1-225ENST00000560005 SLC16A12Q6ZSM3 486 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 DPY19L4Q7Z388 723 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 WDR31Q8NA23 367 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 THEM6Q8WUY1 208 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 VRK1Q99986 396 aaPredicted RBP17.68■□□□□ 0.42
PSEN1-225ENST00000560005 MYOZ1Q9NP98 299 aaPredicted RBP17.68■□□□□ 0.42
PSEN1-225ENST00000560005 MRPL22Q9NWU5 206 aaKnown RBP17.68■□□□□ 0.42
PSEN1-225ENST00000560005 PKD1L1Q8TDX9 2849 aa17.68■□□□□ 0.42
PSEN1-225ENST00000560005 MRPL33O75394 65 aaKnown RBP17.67■□□□□ 0.42
PSEN1-225ENST00000560005 VENTXO95231 258 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 HLA-DPB1P04440 258 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 ITGA5P08648 1049 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 TGM4P49221 684 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 OR12D2P58182 307 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 LSM6P62312 80 aaKnown RBP17.67■□□□□ 0.42
PSEN1-225ENST00000560005 SNRPD2P62316 118 aaKnown RBP17.67■□□□□ 0.42
PSEN1-225ENST00000560005 TUBA1BP68363 451 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 FMODQ06828 376 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 SSX1Q16384 188 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 LIPKQ5VXJ0 399 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 LRFN4Q6PJG9 635 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 DEGS2Q6QHC5 323 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 TUBA1AQ71U36 451 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 GPR137CQ8N3F9 429 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 NSMAFQ92636 917 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 NAA50Q9GZZ1 169 aaKnown RBP17.67■□□□□ 0.42
PSEN1-225ENST00000560005 OCEL1Q9H607 264 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 ISG20L2Q9H9L3 353 aaKnown RBP17.67■□□□□ 0.42
PSEN1-225ENST00000560005 MALT1Q9UDY8 824 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 GNG8Q9UK08 70 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 GSTK1Q9Y2Q3 226 aa17.67■□□□□ 0.42
PSEN1-225ENST00000560005 DHHO43323 396 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 PLPP2O43688 288 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 ZNF254O75437 659 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 SPARCP09486 303 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 GAAP10253 952 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 CELP19835 753 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 GADD45AP24522 165 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 IL2RGP31785 369 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 NTF4P34130 210 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 HCCSP53701 268 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 ZNF684Q5T5D7 378 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 C9orf135Q5VTT2 229 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 RHOUQ7L0Q8 258 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 MS4A15Q8N5U1 240 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 SGMS2Q8NHU3 365 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 MROQ9BYG7 248 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 ULBP2Q9BZM5 246 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 LINC00470Q9BZP3 86 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 SEC61A2Q9H9S3 476 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 SIAEQ9HAT2 523 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 COPS3Q9UNS2 423 aa17.66■□□□□ 0.42
PSEN1-225ENST00000560005 ARPC4-TTLL3A0A0A6YYG9 625 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 A0A1W2PPL8 197 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 OGG1O15527 345 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 SERPINA3P01011 423 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 NPR2P20594 1047 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 SELENOPP49908 381 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 ACTG1P63261 375 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 ROM1Q03395 351 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 TP53I3Q53FA7 332 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 LYPD4Q6UWN0 246 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 FOXL2NBQ6ZUU3 175 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 USP43Q70EL4 1123 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 ZNF679Q8IYX0 411 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 C3orf56Q8N813 242 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 YIPF7Q8N8F6 280 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 SEMA6DQ8NFY4 1073 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 OR2AJ1Q8NGZ0 328 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 C11orf40Q8WZ69 217 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 WACQ9BTA9 647 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 IKZF2Q9UKS7 526 aa17.65■□□□□ 0.42
PSEN1-225ENST00000560005 TRDV1A0A1B0GX56 115 aa17.64■□□□□ 0.41
PSEN1-225ENST00000560005 APEX1P27695 318 aaKnown RBP17.64■□□□□ 0.41
PSEN1-225ENST00000560005 EIF2B1Q14232 305 aaKnown RBP17.64■□□□□ 0.41
PSEN1-225ENST00000560005 SSX6Q7RTT6 188 aa17.64■□□□□ 0.41
PSEN1-225ENST00000560005 KRT77Q7Z794 578 aa17.64■□□□□ 0.41
PSEN1-225ENST00000560005 LINC01356Q8N9X3 169 aa17.64■□□□□ 0.41
PSEN1-225ENST00000560005 ZFAND2BQ8WV99 257 aa17.64■□□□□ 0.41
PSEN1-225ENST00000560005 PELI1Q96FA3 418 aa17.64■□□□□ 0.41
PSEN1-225ENST00000560005 OR8B4Q96RC9 309 aa17.64■□□□□ 0.41
PSEN1-225ENST00000560005 CHCHD6Q9BRQ6 235 aa17.64■□□□□ 0.41
PSEN1-225ENST00000560005 NELFAQ9H3P2 528 aa17.64■□□□□ 0.41
PSEN1-225ENST00000560005 C1orf198Q9H425 327 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms