RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 TPTEP56180 551 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 ECH1Q13011 328 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 PCK2Q16822 640 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 TUSC1Q2TAM9 212 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 SLC27A4Q6P1M0 643 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 PGAP1Q75T13 922 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 SIGLECL1Q8N7X8 197 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 CCDC197Q8NCU1 140 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 DACT3Q96B18 629 aaPredicted RBP14.82□□□□□ -0.04
HDDC3-205ENST00000559898 SLAMF6Q96DU3 332 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 C1orf147Q96MC9 270 aaPredicted RBP14.82□□□□□ -0.04
HDDC3-205ENST00000559898 FEVQ99581 238 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 REEP1Q9H902 201 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 KCNG2Q9UJ96 466 aa14.82□□□□□ -0.04
HDDC3-205ENST00000559898 PPIAL4EA0A075B759 164 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 PPIAL4CA0A0B4J2A2 164 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 CD300LBA8K4G0 201 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 PPIAL4DF5H284 164 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 PPIAL4FP0DN26 164 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 IGHV4-38-2P0DP08 117 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 RPS2P15880 293 aaKnown RBP14.81□□□□□ -0.04
HDDC3-205ENST00000559898 CALB2P22676 271 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 CFPP27918 469 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 CD200P41217 278 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 ENTPD1P49961 510 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 ELF3P78545 371 aaPredicted RBP14.81□□□□□ -0.04
HDDC3-205ENST00000559898 ZNF404Q494X3 552 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 RPL13AP3Q6NVV1 102 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 ZNF826PQ6ZT77 177 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 MRPL21Q7Z2W9 205 aaKnown RBP14.81□□□□□ -0.04
HDDC3-205ENST00000559898 OR6K6Q8NGW6 343 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 CANT1Q8WVQ1 401 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 COPS4Q9BT78 406 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 THTPAQ9BU02 230 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 CHID1Q9BWS9 393 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 ZNF319Q9P2F9 582 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 CTSZQ9UBR2 303 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 AUP1Q9Y679 476 aa14.81□□□□□ -0.04
HDDC3-205ENST00000559898 DHRS12A0PJE2 317 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 GATA3P23771 443 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 FMO3P31513 532 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 MNAT1P51948 309 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 SLC25A1P53007 311 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 ACTG1P63261 375 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 PAX8Q06710 450 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 FAM98BQ52LJ0 330 aaKnown RBP14.8□□□□□ -0.04
HDDC3-205ENST00000559898 ESCO2Q56NI9 601 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 SFRP4Q6FHJ7 346 aaPredicted RBP14.8□□□□□ -0.04
HDDC3-205ENST00000559898 C12orf54Q6X4T0 127 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 ZNF841Q6ZN19 808 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 USP43Q70EL4 1123 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 BPIFB2Q8N4F0 458 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 LINC00471Q8N535 108 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 BOLLQ8N9W6 283 aaKnown RBP14.8□□□□□ -0.04
HDDC3-205ENST00000559898 OR2T33Q8NG76 320 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 SPRYD4Q8WW59 207 aaPredicted RBP14.8□□□□□ -0.04
HDDC3-205ENST00000559898 ASB9Q96DX5 294 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 SSBP3Q9BWW4 388 aaPredicted RBP14.8□□□□□ -0.04
HDDC3-205ENST00000559898 MUC13Q9H3R2 512 aa14.8□□□□□ -0.04
HDDC3-205ENST00000559898 MDFIC2A0A1B0GVS7 189 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 CST1P01037 141 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 RAP2AP10114 183 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 PRKACGP22612 351 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 GATA4P43694 442 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 POU4F2Q12837 409 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 MALLQ13021 153 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 EIF2B1Q14232 305 aaKnown RBP14.79□□□□□ -0.04
HDDC3-205ENST00000559898 OR8G1Q15617 311 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 ZNF181Q2M3W8 571 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 DPY19L4Q7Z388 723 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 WDR86Q86TI4 376 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 ARHGAP24Q8N264 748 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 MUC20Q8N307 709 aaPredicted RBP14.79□□□□□ -0.04
HDDC3-205ENST00000559898 FGFRL1Q8N441 504 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 OR56B2PQ8NGI1 322 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 FAM216AQ8WUB2 273 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 SPTSSAQ969W0 71 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 OTULINQ96BN8 352 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 KCNJ15Q99712 375 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 ADAT1Q9BUB4 502 aaKnown RBP14.79□□□□□ -0.04
HDDC3-205ENST00000559898 SUCNR1Q9BXA5 334 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 CMC2Q9NRP2 79 aa14.79□□□□□ -0.04
HDDC3-205ENST00000559898 PRPF19Q9UMS4 504 aaKnown RBP14.79□□□□□ -0.04
HDDC3-205ENST00000559898 TMEM89A2RUT3 159 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 GGT3PA6NGU5 568 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 C22orf46C9J442 243 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 EGR1P18146 543 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 GNB2P62879 340 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 UBA52P62987 128 aaKnown RBP14.78□□□□□ -0.04
HDDC3-205ENST00000559898 KLHL12Q53G59 568 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 ARMCX4Q5H9R4 360 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 DRAM2Q6UX65 266 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 PRSS45Q7RTY3 260 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 ERI1Q8IV48 349 aaKnown RBP14.78□□□□□ -0.04
HDDC3-205ENST00000559898 BBS1Q8NFJ9 593 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 OR6N2Q8NGY6 317 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 Q8TCH9 128 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 GIPC3Q8TF64 312 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 ZFAND2BQ8WV99 257 aa14.78□□□□□ -0.04
HDDC3-205ENST00000559898 POP5Q969H6 163 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms